DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1gamma and LOC1271252

DIOPT Version :10

Sequence 1:NP_652000.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_310012.1 Gene:LOC1271252 / 1271252 VectorBaseID:AGAMI1_006094 Length:218 Species:Anopheles gambiae


Alignment Length:240 Identity:61/240 - (25%)
Similarity:100/240 - (41%) Gaps:41/240 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYTYPENFRAYKALIAAQY--SGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSE 68
            ||.:|.:..:..||:|.:.  ..|:||:.:.|. || :.:.||:...|...||.. ..|...|.|
Mosquito     6 LYHFPGSPPSRSALLALRNLDLDAEVKIVNLFA-GE-HLADEFVAINPDHTVPTL-VDEDYILWE 67

  Fly    69 SNAIAYLLANEQLRGGKCPFVQAQ------VQQWISFADNEIVPASCAWVFPLLGI----LPQQK 123
            |.|||..|| ||.:.| |....:|      :...:.|....:..|....:..:|..    :||:|
Mosquito    68 SKAIATYLA-EQYKPG-CTLYPSQPKKRGLINHRLYFDSGTLFVALRNVLMTVLRSGETRIPQEK 130

  Fly   124 NSTAKQEAEAVLQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFV 188
                |......|::|:..|....::|||..||||:...:::..|.|..:.   ...:.||:.|  
Mosquito   131 ----KDAVYKALEKLDSYLDGCDWIAGEECTLADLCALANVATLKEIGVG---MEGYANVSGW-- 186

  Fly   189 TILNQKQVQAVVKDYKLCEKALVFDP-KKYAEFQAKTGAAKPQQQ 232
                          |:.|.:...||. ::.|.|......:|.::|
Mosquito   187 --------------YERCRELPGFDENEEGASFLGNAFKSKLEEQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_652000.1 GST_N_EF1Bgamma 4..79 CDD:239342 26/74 (35%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 25/128 (20%)
EF1G 273..376 CDD:459888
LOC1271252XP_310012.1 GstA 4..196 CDD:440390 55/217 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.