DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1gamma and GPRGR27

DIOPT Version :9

Sequence 1:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_309027.2 Gene:GPRGR27 / 1270342 VectorBaseID:AGAP006716 Length:407 Species:Anopheles gambiae


Alignment Length:163 Identity:37/163 - (22%)
Similarity:65/163 - (39%) Gaps:34/163 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 AFETAEGQYLSES---NAIAY--LLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLL 116
            ||......||:|:   |.|..  :|..:|.|    ||..:.:::......| :.....:..||.:
Mosquito    86 AFFAIRTLYLTENVIVNVIVLFAMLECQQSR----PFYASILKELFELGKN-LHDCDASINFPHV 145

  Fly   117 GILPQQKNSTAKQEAEAVLQQLNQKLQD--------ATFLAGERITLADIVVFSSLLHLYEY-VL 172
            ..:      |.:....|||......|.|        .|||....:.:...|:  ::|.||:| .|
Mosquito   146 EAI------TDRLLVCAVLYFSTSSLVDWWADYDPSCTFLCHSVLYILPNVI--NVLALYQYAAL 202

  Fly   173 EPSVRSAFGNVNRWFVTIL---NQKQVQAVVKD 202
            :..|.:.:.:||    ::|   :..|.:..|:|
Mosquito   203 QLIVAACYRSVN----SVLARYHDHQARPKVRD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342 8/26 (31%)
GstA 5..187 CDD:223698 33/143 (23%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 25/125 (20%)
EF1G 271..376 CDD:279041
GPRGR27XP_309027.2 7tm_7 20..402 CDD:285581 37/163 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.