DRSC/TRiP Functional Genomics Resources

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Protein Alignment nerfin-1 and insm1

DIOPT Version :9

Sequence 1:NP_524783.1 Gene:nerfin-1 / 44786 FlyBaseID:FBgn0028999 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001076827.1 Gene:insm1 / 779614 XenbaseID:XB-GENE-993149 Length:441 Species:Xenopus tropicalis


Alignment Length:403 Identity:120/403 - (29%)
Similarity:172/403 - (42%) Gaps:115/403 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 MPHGLGLLTTVASLPPKYRSR------------YLNLKTRCEI-----PL--DLTLKLP---SPL 77
            ||.|..:..:..|.|..||.|            ::.|.|.|..     |.  |...:.|   ||.
 Frog     1 MPKGFLVKRSRKSPPVSYRVREEEEPRGESLPGWMLLATMCPTGGAPPPCSPDRATQAPCCSSPR 65

  Fly    78 PSSDVPMAATFAE-------VYSENTSASSSEVQ----GEVTKVEELP---------VKPPT--- 119
            |    |.|..|..       :||.....|..:.:    |.....|..|         :.|||   
 Frog    66 P----PPAGQFGNPDTVQQALYSPTRPVSREQRERKYLGSPVSAESFPGLGTSSEALLYPPTGTA 126

  Fly   120 ---------PPQSPAGKRKLSRESYDDEPAKMAKKEEEVPVETVESTPAKPVKVAESAPKTNKAS 175
                     ||.|.:              :.:::.:.:.|....:|.||       :.|.|...:
 Frog   127 NGHHGLALLPPVSSS--------------SSVSRSQGKRPAPEPDSKPA-------AMPGTGPGA 170

  Fly   176 TSSGKPS------RNKATRKLKF-DEETSSPVSGTVIRPLEDITDGSMQYSNGDIDPKYNIVEIT 233
            |||..||      :.||.|||.| ||.|:|||.|..|:             .|.::|        
 Frog   171 TSSSAPSKPPAAKKTKAIRKLTFEDEVTTSPVLGLKIK-------------EGPVEP-------- 214

  Fly   234 EETKAELAAIKNVIGDYVCRLCKIKFEDAFGLARHRCACIVLLEYRCPECGKQFNCPANLASHRR 298
            ...:|..:. ...:|:::|:|||.::.|.|.||:|:|:.||.:|||||||.|.|:||||||||||
 Frog   215 PRPRAASSG-PRPLGEFICQLCKEEYSDPFSLAQHKCSRIVRVEYRCPECHKVFSCPANLASHRR 278

  Fly   299 WHKPRKEA-----SKKENRNTTNQPEKQQQVEKKSEEELAFDCQECGKKFKRAAYLRKHQLTHQK 358
            |||||...     :|:|..:..:.|  ...|.:...|:..::|..|.:||:|.||||||.|:||.
 Frog   279 WHKPRPPVASTAQAKEEPLSDRDTP--SPGVSESGSEDGLYECPRCARKFRRQAYLRKHLLSHQA 341

  Fly   359 KEKPAEKQLEMKP 371
            .::|.|..:.|.|
 Frog   342 AKEPEEPGVMMFP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nerfin-1NP_524783.1 C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
C2H2 Zn finger 280..300 CDD:275368 16/19 (84%)
zf-C2H2 334..356 CDD:278523 12/21 (57%)
C2H2 Zn finger 336..356 CDD:275368 12/19 (63%)
insm1NP_001076827.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 8/29 (28%)
SNAG domain. /evidence=ECO:0000250|UniProtKB:Q63ZV0 1..20 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..189 34/170 (20%)
DUF4045 <149..348 CDD:330572 85/229 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..224 4/40 (10%)
C2H2 Zn finger 232..252 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..280 CDD:275368 16/19 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..316 11/39 (28%)
C2H2 Zn finger 319..339 CDD:275368 12/19 (63%)
C2H2 Zn finger 374..393 CDD:275368
C2H2 Zn finger 402..423 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11187
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4442
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002683
OrthoInspector 1 1.000 - - mtm9370
Panther 1 1.100 - - O PTHR15065
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1791
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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