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Protein Alignment nerfin-1 and Insm2

DIOPT Version :9

Sequence 1:	NP_524783.1	Gene:	nerfin-1 / 44786	FlyBaseID:	FBgn0028999	Length:	469	Species:	Drosophila melanogaster
Sequence 2:	NP_064683.2	Gene:	Insm2 / 56856	MGIID:	1930787	Length:	493	Species:	Mus musculus

Alignment Length:	441	Identity:	121/441 - (27%)
Similarity:	162/441 - (36%)	Gaps:	179/441 - (40%)

- Green bases have known domain annotations that are detailed below.

  Fly    14 AEPIEKLSHPHSIGIQLQHKGMPH--GLGLLTTVASLP------------------------PKY 52
            |.|:|.|..|..   .|..:..|.  |.|||.:....|                        |:.
Mouse    19 ARPVEPLFPPPG---PLAAQSSPEEPGRGLLGSPCLAPPQDDAEWGAGGGDGPGPSPARPAGPEL 80

  Fly    53 RSRYLNLKTRCEIPLDLTLKLPSPLPSSDVPMAATFAEVYSENTSASSSEVQGEVTKVEELPVKP 117
            |..:|.   ||         |.||:.:...|.|..|.      ::|.::...||.....::||..
Mouse    81 RRAFLE---RC---------LRSPVSAESFPSATAFC------SAAPAAVTSGEELVPPQVPVSV 127

  Fly   118 PTPPQSPAGKRKLSRESYDDEPAKMAKKEEEVPVETVESTPAKPVKVAESAPKTNKASTSSGKPS 182
            |.|...||             |..:.::.:..|             |..|||...:      ||
Mouse   128 PIPVPGPA-------------PHGLQRRGKGAP-------------VCASAPAAVR------KP- 159

  Fly   183 RNKATRKLKF-DEETSSPVSGTVIRPLEDITDGSMQYSNGDIDPKYNIVEITEETKA---ELAAI 243
              ||.|:|.| ||.|:|||.|..|:                          .||..|   .|..:
Mouse   160 --KAVRRLSFADEVTTSPVLGLKIK--------------------------EEEPGAPARALGGV 196

  Fly   244 KNVIGDYVCRLCKIKFEDAFGLARHRCACIVLLEYRCPECGKQFNCPANLASHRRWHKPRK---- 304
            :..:|:::|:|||.::.|.|.||:|||:.||.:|||||||.|.|:|||||||||||||||.
Mouse   197 RTPLGEFICQLCKHQYADPFALAQHRCSRIVRVEYRCPECDKVFSCPANLASHRRWHKPRPTPAC 261

  Fly   305 EASK----------------KEN----------------------RNTTNQPEKQQQVEKKSEEE 331
            .|||                |||                      |::..:|..|..|..::...
Mouse   262 AASKPPHAPLTPPDPSLATGKENGRVPRTDDQHPQAPDSSGDGQHRDSAARPGLQALVYPEAARP 326

  Fly   332 LA-------------------------FDCQECGKKFKRAAYLRKHQLTHQ 357
            .|                         |.|..|.|||:|.||||||..||:
Mouse   327 QAPYPEVILGRHGPGSSGASAGATSEVFVCPYCHKKFRRQAYLRKHLGTHE 377

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.