DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37A and rpl37a

DIOPT Version :9

Sequence 1:NP_001188691.1 Gene:RpL37A / 44783 FlyBaseID:FBgn0261608 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_001005137.1 Gene:rpl37a / 448720 XenbaseID:XB-GENE-5811555 Length:92 Species:Xenopus tropicalis


Alignment Length:92 Identity:69/92 - (75%)
Similarity:80/92 - (86%) Gaps:0/92 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTVA 65
            ||||||||||||||||||||||||||||:||:||:|||||||||..|||..||||.|..|.:.||
 Frog     1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKIVA 65

  Fly    66 GGAWVYSTTAAASVRSAVRRLRETKEQ 92
            ||||.|:||:|.:|:||:|||:|.|:|
 Frog    66 GGAWTYNTTSAVTVKSAIRRLKELKDQ 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37ANP_001188691.1 PTZ00255 1..90 CDD:240332 67/88 (76%)
rpl37aNP_001005137.1 Ribosomal_L37ae 4..88 CDD:396374 63/83 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 142 1.000 Domainoid score I4662
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H47964
Inparanoid 1 1.050 149 1.000 Inparanoid score I4282
OMA 1 1.010 - - QHG62221
OrthoDB 1 1.010 - - D1621758at2759
OrthoFinder 1 1.000 - - FOG0001539
OrthoInspector 1 1.000 - - oto103306
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1138
SonicParanoid 1 1.000 - - X1113
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.010

Return to query results.
Submit another query.