DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37A and LOC108348813

DIOPT Version :9

Sequence 1:NP_001188691.1 Gene:RpL37A / 44783 FlyBaseID:FBgn0261608 Length:92 Species:Drosophila melanogaster
Sequence 2:XP_038953301.1 Gene:LOC108348813 / 108348813 RGDID:11421033 Length:127 Species:Rattus norvegicus


Alignment Length:88 Identity:56/88 - (63%)
Similarity:65/88 - (73%) Gaps:0/88 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTVAGGAW 69
            ||||.|:|||||.|||||.|||||..|:|..|||||||.|..|||..||||.|..|.:||||.||
  Rat    40 TKKVMIIGKYGTHYGASLWKMVKKTVISQPIKYTCSFCSKTKMKRRAVGIWHCGSCMKTVAGRAW 104

  Fly    70 VYSTTAAASVRSAVRRLRETKEQ 92
            :|:||.|.:|:.||||.:..|:|
  Rat   105 IYNTTTAVTVKFAVRRWKGLKDQ 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37ANP_001188691.1 PTZ00255 1..90 CDD:240332 54/84 (64%)
LOC108348813XP_038953301.1 Ribosomal_L37ae 40..120 CDD:396374 52/79 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1621758at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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