DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NiPp1 and AT5G38840

DIOPT Version :10

Sequence 1:NP_611177.1 Gene:NiPp1 / 44748 FlyBaseID:FBgn0026402 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_198700.2 Gene:AT5G38840 / 833875 AraportID:AT5G38840 Length:735 Species:Arabidopsis thaliana


Alignment Length:409 Identity:96/409 - (23%)
Similarity:158/409 - (38%) Gaps:111/409 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDIPSWAGKPPTGLHLDVLKDDKLVQKLMVDEKRCYLFGRNSQMNDFCIDHASCSRVHSAFVYHK 69
            |.||.|:|.|.....|:|||:..:|:||.|.:|..|||||:. :.||.::|.|.||.| |.:.:|
plant    90 YTIPEWSGPPCHQFQLEVLKEGAIVEKLDVYKKGAYLFGRDG-ICDFALEHPSISRFH-AVIQYK 152

  Fly    70 HLNIAYLVDLGSTHGTFIGTLRLEAHKPTQLQINSTFHFGASTRNYI------------------ 116
            ....||:.||||||||.:...:::......|.:.....||.|||.||                  
plant   153 RSGAAYIFDLGSTHGTTVNKNKVDKKVFVDLNVGDVIRFGGSTRLYIFQGPSDLMPPEKDLQLIR 217

  Fly   117 ---LRERPSGHHSNIMEDLPLSETSDGALLGLPES--QTELDNLTE--YNTAHN----------- 163
               :|...|...:::......:..:||...|:.|.  :.|.|::.|  :.|...           
plant   218 EAKMRMEMSEREASLRRARQQASMADGVSWGMGEDAIEEEEDDVEEITWQTYSGELTPKQEKTKE 282

  Fly   164 ---RRISMLGIDDDTNMRK-----------QNALKQGRRTRNVTFNDEEIVINPEDVDPNVGRFR 214
               :|:..:|     :|:|           |..|.||::|: :..|::......|:::       
plant   283 KVLKRLEKIG-----HMKKEVAAIRAKDISQGGLTQGQQTQ-IARNEQRTAELLEELE------- 334

  Fly   215 NLVQT------TVVPAKRARCDVN--HMGIHSGNSSLS--------------SANAAHVHQMFQ- 256
            ||.:|      ..:.||..|...:  ..||......||              |......:|..: 
plant   335 NLEETLNDSIRESLGAKTGRKPTHGKKKGIVEDEEDLSSDEDDFYDRTQKKPSTKKGSENQTVET 399

  Fly   257 -QSLVDMKQQ-HREMPPPNAVLHSPTNSLYQGLPAEMHGKGDLEPISPLSIGSKLGLLLPNPAPE 319
             .||||.:.. .:|:...|..|.:..:            |.:.|.::.::.|..|         :
plant   400 VDSLVDKRDNVLKEIEAKNEQLLTEKS------------KMETENVTEVTSGDSL---------D 443

  Fly   320 VLPVYDEAVETSTLAQKLA 338
            .|..|...:.|:.:..|.|
plant   444 ALDAYMTGLSTTLVQDKTA 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NiPp1NP_611177.1 FHA_PPP1R8 12..119 CDD:438726 43/127 (34%)
AT5G38840NP_198700.2 FHA_Kanadaptin 103..202 CDD:438729 41/100 (41%)
PTZ00108 <280..602 CDD:240271 39/217 (18%)

Return to query results.
Submit another query.