DRSC/TRiP Functional Genomics Resources

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Protein Alignment NiPp1 and snip1

DIOPT Version :10

Sequence 1:NP_611177.1 Gene:NiPp1 / 44748 FlyBaseID:FBgn0026402 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001020641.1 Gene:snip1 / 793873 ZFINID:ZDB-GENE-041026-3 Length:374 Species:Danio rerio


Alignment Length:160 Identity:44/160 - (27%)
Similarity:69/160 - (43%) Gaps:36/160 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDIPSWAGKPPTGLHLDVLKDDKLVQKLMVDEKRCYLFGRNSQMNDFCIDHASCSRVHSAFVYH- 68
            |:.|..|..|.....|...|:|:.:..:.:..:..||.||..::.|..|||.|||:.|:.|.|. 
Zfish   224 YNEPPEARIPKRRWRLYPFKNDEPLPVMYIHRQSAYLLGRLRKIADIPIDHPSCSKQHAVFQYRL 288

  Fly    69 -KHLNI---------AYLVDLGSTHGTFIGTLRLEAHKPTQLQINSTFHFGASTRNYILRERPSG 123
             :...:         .|::||||.:||::...|:|..:..:|:......||.|:|.|:|      
Zfish   289 VEFTRVDGTAGRRVKPYIIDLGSGNGTYLNNQRIEPQRYYELKEKDVLKFGFSSREYVL------ 347

  Fly   124 HHSNIMEDLPLSETSDGALLGLPESQTELD 153
                      |.|.||         .||:|
Zfish   348 ----------LHEFSD---------TTEVD 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NiPp1NP_611177.1 FHA_PPP1R8 12..119 CDD:438726 34/117 (29%)
snip1NP_001020641.1 PRK12678 4..>191 CDD:237171
FHA_SNIP1 202..350 CDD:438770 38/141 (27%)
Blue background indicates that the domain is not in the aligned region.

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