DRSC/TRiP Functional Genomics Resources

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Protein Alignment NiPp1 and snip1

DIOPT Version :10

Sequence 1:NP_611177.1 Gene:NiPp1 / 44748 FlyBaseID:FBgn0026402 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_988890.1 Gene:snip1 / 394485 XenbaseID:XB-GENE-481343 Length:370 Species:Xenopus tropicalis


Alignment Length:165 Identity:41/165 - (24%)
Similarity:72/165 - (43%) Gaps:25/165 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDIPSWAGKPPTGLHLDVLKDDKLVQKLMVDEKRCYLFGRNSQMNDFCIDHASCSRVHSAFVYH- 68
            |..|..|..|.....|...|:|:.:..:.:..:..||.||..::.|..|||.|||:.|:...|. 
 Frog   218 YSEPPEARTPKKRWRLYPFKNDEALPVMYIHRQSAYLLGRQRRIADIPIDHPSCSKQHAVLQYRM 282

  Fly    69 -----------KHLNIAYLVDLGSTHGTFIGTLRLEAHKPTQLQINSTFHFGASTRNYILRERPS 122
                       :.:. .|::||||.:||::...|:|..:..:|:......||.|:|.|::.    
 Frog   283 VQFTRANGTSGRRVR-PYIIDLGSGNGTYLNNQRIEPQRYYELKEKDVLKFGFSSREYVVL---- 342

  Fly   123 GHHSNIMEDLPLSETSDGALLGLPESQTELDNLTE 157
             |.|:...::...:..|       :.:.|.|..|:
 Frog   343 -HESSDTSEVDKKQDDD-------DDEDEEDEGTD 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NiPp1NP_611177.1 FHA_PPP1R8 12..119 CDD:438726 32/118 (27%)
snip1NP_988890.1 PRK12678 6..>190 CDD:237171
FHA_SNIP1 196..344 CDD:438770 35/131 (27%)
Blue background indicates that the domain is not in the aligned region.

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