DRSC/TRiP Functional Genomics Resources

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Protein Alignment msk and MTR4

DIOPT Version :10

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_012485.1 Gene:MTR4 / 853397 SGDID:S000003586 Length:1073 Species:Saccharomyces cerevisiae


Alignment Length:938 Identity:175/938 - (18%)
Similarity:301/938 - (32%) Gaps:343/938 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 YGSPSNVVS-EKYQ----KFAEWYLPTF------SQGVLEVLLKILDQYRNRVYVSPRVLTDV-- 327
            |.||...:| :||:    :|.:..|.|.      ..|.|.:..:||   |:.:|....|:.:|  
Yeast   197 YTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEIL---RSMLYRGSEVMREVAW 258

  Fly   328 -----LNYLKNAVSHAYTWK---LIKPHMVA-VIQDVIFP-IMSFTDSDQELW----ESDPYEYI 378
                 ::|:::. .....|:   ::.|..|. |......| .|.|.:     |    .|.|...:
Yeast   259 VIFDEVHYMRDK-ERGVVWEETIILLPDKVRYVFLSATIPNAMEFAE-----WICKIHSQPCHIV 317

  Fly   379 RLKFDIFEDYATPV-----PAAQSLLHSMCKK----RKGILPKAMATIM-QIITSPNA-DNKQKD 432
            ...|     ..||:     ||....::.:..:    |:....||||:|. ||...||: |::.|.
Yeast   318 YTNF-----RPTPLQHYLFPAHGDGIYLVVDEKSTFREENFQKAMASISNQIGDDPNSTDSRGKK 377

  Fly   433 GALHMIGTLADVLLKKASYRDQVESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQVLA 497
            |..:..|:      .|...:..:..::                 :..|...|       ||.::.
Yeast   378 GQTYKGGS------AKGDAKGDIYKIV-----------------KMIWKKKY-------NPVIVF 412

  Fly   498 EIMRLTTNALLTDKELPVKVEAAIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENE---- 558
            ...:...      :||.:|:.     ::..:|.||     :..:.:|....:.::.||:.|    
Yeast   413 SFSKRDC------EELALKMS-----KLDFNSDDE-----KEALTKIFNNAIALLPETDRELPQI 461

  Fly   559 -DLTNVMQKIVCTFTEQLLPVATEICQHL----------AT-TFSQVLE---------------- 595
             .:..::::.:......|||:..|:.:.|          || |||..|.                
Yeast   462 KHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDG 526

  Fly   596 ------------------SEEGSDEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHI 642
                              ...|.|::.|..|.:...:|         |.|...:      |.|. 
Yeast   527 QQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKME---------PQVAKGM------VKGQ- 575

  Fly   643 FQHNITDFYEETFSLVYD-----LTAKAISPEMWQMLELIYQVFKK------------------D 684
                 .|..:..|.|.|:     :..:.||||.  |||..:..|:.                  |
Yeast   576 -----ADRLDSAFHLGYNMILNLMRVEGISPEF--MLEHSFFQFQNVISVPVMEKKLAELKKDFD 633

  Fly   685 GIDY--------FIDIMPALHNY-----VTVDTPA----FLSNPNRLL-------------AILD 719
            ||:.        :.:|..|:..|     ..|..||    || .|.||:             |::|
Yeast   634 GIEVEDEENVKEYHEIEQAIKGYREDVRQVVTHPANALSFL-QPGRLVEISVNGKDNYGWGAVVD 697

  Fly   720 MCKTMLTSSPGEDPECHAAKLMEVIILQCKGQIDSVIHMFVEL--ALSRLTREVQSSELRTMCLQ 782
            ..|.:...:|......|.:.::.|::...  .|||.:::....  .|....|..:..| :::|..
Yeast   698 FAKRINKRNPSAVYTDHESYIVNVVVNTM--YIDSPVNLLKPFNPTLPEGIRPAEEGE-KSICAV 759

  Fly   783 VVIA----------ALYYNPQLLLSILDKMSQQNNDSISAHF---------IKQWLHDTDCFLGI 828
            :.|.          .||....:..|...:...::...::..|         :|....:.:.||.:
Yeast   760 IPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKL 824

  Fly   829 HDRKLCVLGLCTLISLGEAKPQV-LSEVAGKIVPALILLFDGLKRAYESRAQEEEEDEEEEDGDD 892
            . :|:.||.  |.:|.......: |.|:.||.                ||..:..||.::     
Yeast   825 M-KKIDVLN--TKLSSNPLTNSMRLEELYGKY----------------SRKHDLHEDMKQ----- 865

  Fly   893 CEEALSSDEDDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDAEESVGDLNETGL 957
                                      .|.|.:||    :|.|:.||..........:|       
Yeast   866 --------------------------LKRKISES----QAVIQLDDLRRRKRVLRRLG------- 893

  Fly   958 ESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLT--------SNLTPEQAKALQEVVV 1014
              |.||.|..|.:.         .|...:|:.|:   .|||        :.|.||||.||.....
Yeast   894 --FCTPNDIIELKG---------RVACEISSGDE---LLLTELIFNGNFNELKPEQAAALLSCFA 944

  Fly  1015 TADQRKAAKESKLIEKQGGFAFPQTAVP 1042
            ..::.|.|...|          |:.|.|
Yeast   945 FQERCKEAPRLK----------PELAEP 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 169/907 (19%)
MTR4NP_012485.1 Dob10 143..1068 CDD:443638 175/938 (19%)

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