DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msk and SXM1

DIOPT Version :9

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_010683.3 Gene:SXM1 / 852004 SGDID:S000002803 Length:944 Species:Saccharomyces cerevisiae


Alignment Length:1008 Identity:232/1008 - (23%)
Similarity:439/1008 - (43%) Gaps:125/1008 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAQKLTELLRATIDPNPEQRKAAEDQLAQIHKIIGFVPTILQIVMQTTVEQPVRQAGAVYLKNL 65
            ::.|.:...:..|:..:.:..|.||.||.:..|..||...:|.||........||.:.|:||||.
Yeast     2 VQEQAILSCIEQTMVADAKIIKEAEQQLFEFQKQPGFTSFLLNIVSDDNFALNVRLSSAIYLKNK 66

  Fly    66 INSSWSDHEAKPGEPIPFSIHEQDRAMIRGAIVDAIVHAPE--LIRVQLSVCVNHII--KSDFPG 126
            |:.|| |.:.:.|      |...::..|:..:::.:|...|  .||..|:..:|.|:  :.|   
Yeast    67 IHRSW-DTKREDG------IKADEKLSIKERLIETLVKNCENNHIRPILTETINGILVGQED--- 121

  Fly   127 RWPQVVDSISIYLQNQDVNGWNGALVTMYQLVKTYEYKRHEERTPLNEAMNLLLPMIYQLMVRLL 191
             | .:...|...|.:.|.:.....|:.::||.|.:.:.....|..::..:..|.|::..:...:.
Yeast   122 -W-DLAPIIKNLLSSGDASYIYPGLLLLFQLCKAHRWDMVGSRDYIDSVIEELFPIVEGIASNIG 184

  Fly   192 AEQSEQSVLLQKQILKIYYALTQYTLPLDLITKEIFSQWMEICRQVADRAVP-DSSHLDDDERTE 255
            ::...:|..:...|||.:.......||......|....|:::...:..:.:| :...||..:|:.
Yeast   185 SQTDYRSNEILYLILKSFKYACLNNLPQYFSQPERIMSWVQLHLYLCSKPLPVEVMELDPADRSL 249

  Fly   256 FPYWKTKKWALHIMVRMFERYGSPSNVVSEKYQKFAEWYLPTFSQGVLEVLLKILDQY-RNRVYV 319
            ....|..||....:.|..:||...:..::   ::|.::...|....:|....|.::.: .|.:::
Yeast   250 DKRVKVNKWGFGNLNRFLQRYNKITKAIT---KEFIDYIFNTIVPIILREFFKDIEAWGNNSLWL 311

  Fly   320 SPRVLTDVLNYLKNAVSHAYTWKLIKPHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDI 384
            |...|..::::|:..|:....:.||:||:..:.::||||.:...:...||.|.|..||.|..|||
Yeast   312 SDSSLYFLISFLEKCVTIDQLYPLIEPHLQIIFENVIFPCLCANEQSIELLEDDQEEYTRRYFDI 376

  Fly   385 FEDYATPVPAAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNK------QKDGALHMIGTLAD 443
            ..:.:||..|:...:..:..||...|...:..|..|.|..:|::.      :::|||..:..|  
Yeast   377 NREGSTPDAASADFIFLIGSKRPEKLNNILPFINDIFTRFDANSSDINMAFKEEGALRTLSNL-- 439

  Fly   444 VLLKKASYRDQ---VESMLTTYVFPEF-QNPAGHMRARACWVLHYFCDVQIKNPQVLAEIMRLTT 504
                 .|:.|:   :|::...::.|.. |:....:.||:...:..:.: :.|:..:|:::..||.
Yeast   440 -----FSFIDEPSVLENIFGHFIVPLLSQDKYMFLVARSLETIALYSE-EFKDMNILSQLFELTY 498

  Fly   505 NALLTDKELPVKVEAAIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENEDLTNVMQKIVC 569
            ...|....|||::|||..::..|.|..:....|.|.:..:.::||.:.:..|.:.|:.||:.:|.
Yeast   499 TNFLNSNVLPVQIEAADAIKCLIVSNPQIHPAVSAHVPGMMEKLLKLSKIFEIDILSEVMEALVE 563

  Fly   570 TFTEQLLPVATEICQHLATTFSQVL--------ESEEGSD-EKAITAMSLLNTIETLLSVMEEHP 625
            .|:::|.|.|.::..:|...|.::.        |:...|| |:.|.|..||.|:.|::..|.:.|
Yeast   564 RFSDELSPFAKDLASNLVEQFLRIAQALVENPSETYSASDQEQEIQASGLLQTMTTMVMSMNKVP 628

  Fly   626 DVLLNLHPIVINVVGHIFQHNITDFYEETFSLVYDLTAKA------ISPEMWQMLELIYQVFKKD 684
             ::.:|.|:|..||    .|....|..|...|:..||..:      |:|.:|::|..|...|:..
Yeast   629 -LIESLAPVVKFVV----LHAQISFITEAVDLLDALTISSHLLYNQIAPPIWELLHDILDSFQTY 688

  Fly   685 GIDYF--IDIMPALHNYVTVDTPAFLSNPNRLLAILDMCKTMLTSSPGEDPECHAAKLMEVIILQ 747
            .:|||  ..|.     :.|:....|..:...:..:|::....|.|....|.| |..:::....|.
Yeast   689 AMDYFEAYSIF-----FETIVMTGFPQDQTYVQPLLEILSAKLESEVDYDIE-HVMQILMYFALS 747

  Fly   748 CKGQIDSVIHMFVELALSRLTREVQSSE---LRTMCL-QVVIAALYYNPQLLLSILDKMSQQNND 808
            .:           ::.|.....:|.:::   |.:.|: ::.:|.|:..|...|.|::      |:
Yeast   748 MR-----------DIPLFSKAIKVSTNDELGLDSKCIVKLGLANLFAKPIETLQIME------NE 795

  Fly   809 SISAHFIKQWLHDTDCFLGIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRA 873
            ..:.:|...|.::.  |..:...||.||.:.||:.:.|. |..:|.:...:...|:.|...|.:|
Yeast   796 GFTINFFTNWFNEK--FYSVFAIKLQVLVILTLLKMPEV-PNSVSPLLNNLTNKLVELTLSLPKA 857

  Fly   874 YESRAQEEE---------EDEEEEDGDDCEEALSSDEDDMDEMAPDYLDKLAE---FAKTKGNES 926
            ..:|....|         .:||||...:|       :|||.|...|.::...|   |.|...|| 
Yeast   858 IRNRDAVTEGKSLEGDLTPEEEEEYFIEC-------DDDMKETVLDQINVFQEVHTFFKNLQNE- 914

  Fly   927 GFEVKAEIKDDDADSDGDAEESVGDLNETGLES 959
                       ||   |..|:.:..|:|:..:|
Yeast   915 -----------DA---GKYEKIINYLDESKRDS 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 232/1005 (23%)
IBN_N 24..103 CDD:281761 24/78 (31%)
SXM1NP_010683.3 SXM1 3..940 CDD:227943 232/1007 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 73 1.000 Domainoid score I2196
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53555
OrthoFinder 1 1.000 - - FOG0002119
OrthoInspector 1 1.000 - - otm46548
orthoMCL 1 0.900 - - OOG6_101190
Panther 1 1.100 - - O PTHR10997
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.780

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