DRSC/TRiP Functional Genomics Resources

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Protein Alignment msk and AT3G17340

DIOPT Version :9

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001189916.1 Gene:AT3G17340 / 820997 AraportID:AT3G17340 Length:1093 Species:Arabidopsis thaliana


Alignment Length:1192 Identity:240/1192 - (20%)
Similarity:431/1192 - (36%) Gaps:361/1192 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QKLTELLRATIDPNPEQRKAAE--DQLAQIHKIIGFVPTILQIVMQTTVEQP-VRQAGAVYLKNL 65
            |.||.:...::      |:|.|  |.|:.  |:..|...:|.|...:  |.| ::.|.|.||||.
plant    17 QTLTSIDGVSV------REATEALDLLST--KLPHFPYRLLSIASGS--ENPSLKVAAATYLKNF 71

  Fly    66 INSSWSDHEAKPGEPIPFSIHEQDRAMIRGAIVDAIVHAPELIRVQLSVCVNHIIKSDF--PGRW 128
            ...|    ....|.....|...:|:.::  |::.|   .|.:::|.|.: ::.::.|:|  ...|
plant    72 TRKS----TGTEGTISEVSKEFKDQLLL--ALLQA---EPAVLKVLLEL-LHIVVVSEFVRKNAW 126

  Fly   129 PQVVDSISIYLQNQDV-----NGWN--GALVTMYQLVKTYEY----KRHEERTPL---NEAMNLL 179
            |::|..:...::...:     :.|:  .||:.:..:||.::|    |..:|..|.   :.|..:|
plant   127 PKLVPELRSAIEKSSLISSSNSSWSTVNALMVLLTVVKPFQYFLQPKLAKEPVPQQLESIAREIL 191

  Fly   180 LPMI---YQLMVRLLAEQSEQSVLLQKQ---ILKIYYALTQYTLPLDLITKEIFSQWMEICRQVA 238
            :|::   ::|:.:.|.......:.|:|.   |.|..|...:..:| ..::..:.|...::.|   
plant   192 VPLVSVLHRLIDKALTTHGWDELELEKTLHIICKCLYFSVKSHMP-SALSPLLGSFCQDMIR--- 252

  Fly   239 DRAVPDSSHLDDDERTEFPYWKTKKWALHIMVRMFERYGSPSNVVSEKYQKFAEWYLPTFSQGVL 303
               :.||...|              |::           :||           :.||.....|..
plant   253 ---ILDSLSFD--------------WSV-----------TPS-----------DGYLIRSKAGKR 278

  Fly   304 EVLLKILDQYRNRVYVSPRVLTDVLNYLKNAVSHAYT---------------------------- 340
            .:||......|:|.| |.:::.:::|.....|.|:..                            
plant   279 SLLLFCTLVSRHRKY-SDKLVPEIINCSMKIVKHSSNIGKLGCLTERIISLAFDVISRVMEIGPG 342

  Fly   341 WKLIKPHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKF------------DIFE------- 386
            |:|:.||...::...|||.:...:.|...||.|..|:||...            |:|.       
plant   343 WRLLSPHFSFLLDSAIFPALVLNERDISEWEEDADEFIRKNLPSELEEISGWRDDLFTARKSAMN 407

  Fly   387 -------DYATPVPAAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQK-DGALHMIGTLAD 443
                   ....||....:...:.||::||              ..|..|.|: .|.|.::..|:.
plant   408 LLCVLAMSKGPPVSTTNTASPAACKRKKG--------------EKNRGNNQRCMGDLLVLPFLSK 458

  Fly   444 VLLKKASYR----------------------------DQVESMLTTYVFPEFQNP--AGHMRARA 478
            ..:...||:                            :.|.|.:.|.|.|.:..|  :.::.|.|
plant   459 FPVPSKSYKLDASTSAAYFGVLMAYGSLQEFIQEQNPEYVASFVRTRVLPIYSTPDCSPYLVASA 523

  Fly   479 CWVLHYF--CDVQIKNPQVLAEIMRLTTNALLTDKEL---PVKVEAAIGLQMFISSQDEAP---- 534
            .|||...  |..:..|..|.:.:::..  |:....|:   ||:..||.|:...:.::.:.|    
plant   524 NWVLGELASCLPEEMNADVFSSLLKAL--AMPDQVEISCYPVRFSAAGGIGSLLENEYQPPELLP 586

  Fly   535 --QYVEAQI------KEITKELLTIIRETENEDLTNVMQKIVCTFTEQLL--------PVATEIC 583
              |::..:|      ..:..:||..:.|:.|:|:...:..||.:....:|        |.:..|.
plant   587 LLQFITGKIGNEEDEDSMLFQLLKSVVESGNQDIAMHIPYIVSSLVSNMLKFMHPSEDPWSQAIL 651

  Fly   584 QHLAT--TFSQVLESEE-GSDEKAITAMSL----LNTIETLLSVMEEHPDVLLNLHP-------- 633
            ..|.|  ..:|..||.: .:||:...|..:    ..||...||.:.:|..:..::.|        
plant   652 GGLETLAAMTQTYESSKPEADEENNQATEIWLTGQGTISKALSALLQHAWLATDVPPTSCIDHLS 716

  Fly   634 -----IVINVVG-HIF-QHNITDF-------------YEETFSL-VYDLTAKAISPEMWQMLELI 677
                 |||.... ::| :..:||.             :||:..| |:|            .:|.:
plant   717 TMLRFIVIAATNCNVFVELRLTDLLIVWADILASWNGWEESEDLSVFD------------CIEEV 769

  Fly   678 YQVFKKDGIDYFI--DI-----MPALHNYVTVDTPAFLSNPNRLLAILDMCKTMLTSSPGEDPEC 735
            ..:..|.|...|:  ||     ||.....|.....:|:|.     |||:     ..|:......|
plant   770 VGINNKYGFRSFLFRDIPSPPAMPVRPRSVVESIGSFVSK-----AILE-----YPSATRRACSC 824

  Fly   736 -HAAKLMEVIILQCKGQIDSVIHMFVELALSRL--TREVQSSELRTMCLQVVIAALYYNPQLLLS 797
             |....:.......:|...|:..:|.|.|.|..  .||...:..|.:.|.:....:.|: .::..
plant   825 VHTLLYVPDYSSDIEGVGKSLAMVFAESAFSHFLALREKPCTLWRPLLLAISSCYISYS-DIVEG 888

  Fly   798 ILDKMSQQNNDSISAHFIKQWLHDTDCFLGIHDRKLCVLGLCTLISLG-EAKPQVLSEVAGKIVP 861
            :|:|:       ||..|                 :|.|..|....||. :..|.|:||....:|.
plant   889 VLEKV-------ISGGF-----------------ELWVSSLAFSYSLTCDDSPSVVSETKRPLVS 929

  Fly   862 ALILL----------------------FDGLKRAYESRAQE--EEEDEEEEDGDDCEEALSSDE- 901
            .:.|:                      |..|..| ..|.:|  ||.|::|:||:..||...|:| 
plant   930 VMTLVKVIEHLLDVRHGNATDDLARKCFVSLMEA-SRRLKEVNEETDDDEDDGEPGEEETESEET 993

  Fly   902 ---------DDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKD----DDAD-SDGDAEESVGDL 952
                     |:.:|...::|::.|            :|.||::|    ::|| .|.|.|..:|.|
plant   994 DSNDEDSESDECEETEEEFLERYA------------KVAAELEDSEVIEEADEEDDDHEIDLGSL 1046

  Fly   953 NETGLESFTTPIDDEENESAID 974
            ||...:.....:.::.::..|:
plant  1047 NEIDPQKLVLSLMEKHHQKVIN 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 240/1192 (20%)
IBN_N 24..103 CDD:281761 21/81 (26%)
AT3G17340NP_001189916.1 IBN_N 30..91 CDD:281761 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10997
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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