DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msk and Ipo8

DIOPT Version :9

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001074582.1 Gene:Ipo8 / 320727 MGIID:2444611 Length:1010 Species:Mus musculus


Alignment Length:1028 Identity:490/1028 - (47%)
Similarity:711/1028 - (69%) Gaps:35/1028 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAQKLTELLRATIDPNPEQRKAAEDQLAQIHKIIGFVPTILQIVMQTTVEQPVRQAGAVYLKNL 65
            |:..::.:.|:.|||  |:.|.|||.:|.|.:|||.|.|::|:|::...||.|||||.|:||||:
Mouse     1 MDLNRIIQALKGTID--PKLRIAAETELNQSYKIINFAPSLLRIIVSDHVEFPVRQAAAIYLKNM 63

  Fly    66 INSSWSDHEAKPGEPI-PFSIHEQDRAMIRGAIVDAIVHAPELIRVQLSVCVNHIIKSDFPGRWP 129
            :...|.|.|..|||.| ||:|||.||..||..||:.|:.:|:|:||||::|:..||:.||||.||
Mouse    64 VTQYWPDREPPPGEVIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMCLRVIIRHDFPGHWP 128

  Fly   130 QVVDSISIYLQNQDVNGWNGALVTMYQLVKTYEYKRHEERTPLNEAMNLLLPMIYQLMVRLLAEQ 194
            .|||.|..|||:.:...|.|:|:.:||||||||||:.|||.||..||.:.||.|.|.:::||.:.
Mouse   129 AVVDKIDYYLQSPNSGSWLGSLLCLYQLVKTYEYKKAEEREPLLAAMQIFLPRIQQQILQLLPDA 193

  Fly   195 SEQSVLLQKQILKIYYALTQYTLPLDLITKEIFSQWMEICRQVADRAV-PDSSHLDDDERTEFPY 258
            |..|||||||||||:|||.||.|||.|:..:..:.||||.|.:.||.| |::..:|:|:|.|..:
Mouse   194 SHYSVLLQKQILKIFYALVQYALPLQLVNHQTMTTWMEIFRTIIDRTVPPETLQIDEDDRPELVW 258

  Fly   259 WKTKKWALHIMVRMFERYGSPSNVVSEKYQKFAEWYLPTFSQGVLEVLLKILDQYRNRVYVSPRV 323
            ||.|||||||:.|:|||||||.||..| |.:|:|::|.|::.|:.:||||||||||.:.|::|||
Mouse   259 WKCKKWALHIVARLFERYGSPGNVTKE-YFEFSEFFLKTYAVGIQQVLLKILDQYRQKEYIAPRV 322

  Fly   324 LTDVLNYLKNAVSHAYTWKLIKPHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDY 388
            |....|||...|.||.|||.:|||:..:.:||||.:|.:.|.|:|||:.|||||||:||||||||
Mouse   323 LQQAFNYLNQGVVHAVTWKQMKPHIQNISEDVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDY 387

  Fly   389 ATPVPAAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVLLKKASYRD 453
            |:|..|||:||::..||||.:|||.||...||:|.||.|.::||||||:||:||::||||:.::|
Mouse   388 ASPTTAAQTLLYTAAKKRKEVLPKMMAFCYQILTDPNFDPRKKDGALHVIGSLAEILLKKSLFKD 452

  Fly   454 QVESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQVLAEIMRLTTNALLTDKELPVKVE 518
            |:|..|..:|||...:..|::|||:|||||.|..::..|...|...:.|...:|:.|:|:|||||
Mouse   453 QIELFLQNHVFPLLMSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSLIEDEEMPVKVE 517

  Fly   519 AAIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEIC 583
            ||:.||..||:|.:|.::::..::.|.:|||.|:|||||:|:|||:||::|.:::.:..:|.:..
Mouse   518 AALALQSLISNQAQAKEHMKPYVRFIMQELLHIVRETENDDVTNVIQKLICEYSQDVASIAVDTT 582

  Fly   584 QHLATTFSQVLESEEGS--DEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQHN 646
            ||||..|.:||:|:|..  ::|.:.||.:|:||:|:|:|:|:||:::..|..|.:.::..:.|.:
Mouse   583 QHLAEIFGKVLQSDEYEEIEDKTVMAMGILHTIDTILTVVEDHPEIIQQLENICLRIIDLVLQKH 647

  Fly   647 ITDFYEETFSLVYDLTAKAISPEMWQMLELIYQVFKKDGIDYFIDIMPALHNYVTVDTPAFLSNP 711
            :.:||||..||.|:||...|||:|||:|.::|:||::|..:||.|:||.|||||||||.|.||||
Mouse   648 VIEFYEEILSLAYNLTCHTISPQMWQLLGILYEVFQQDCFEYFTDMMPLLHNYVTVDTNALLSNP 712

  Fly   712 NRLLAILDMCKTMLTSSPGEDPECHAAKLMEVIILQCKGQ-IDSVIHMFVELALSRLTREVQSSE 775
            ..|..:..||:.:|....|||.||:||||:|||||||||: ||..|.:|::|.|.||||.|::||
Mouse   713 KHLEVLFTMCRKVLCGEAGEDAECYAAKLLEVIILQCKGRGIDQCIPLFIQLVLERLTRGVKTSE 777

  Fly   776 LRTMCLQVVIAALYYNPQLLLSILDKMSQQNNDS-ISAHFIKQWLHDTDCFLGIHDRKLCVLGLC 839
            ||||||||.||||||:|:||...|:::...:|.. :::.||.||::|||.|||.||||:|::||.
Mouse   778 LRTMCLQVAIAALYYSPELLFHTLEQVQLPHNPGPVTSQFINQWMNDTDYFLGHHDRKMCIIGLS 842

  Fly   840 TLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAYESRAQEEEEDEEEEDGDDCE--EALSSDED 902
            .|:.| :.:|..:..||.:|:|:::.||.|||:...:|.....|:..:.:..|.|  |.:||:|:
Mouse   843 VLLEL-QNRPPAVDAVAAQILPSILFLFLGLKQVCATRQTVNRENHSKAEKVDIEENEEISSEEE 906

  Fly   903 DMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDAEESVGDLNETGLESFTTPIDDE 967
            :...::          |:...::.|   ::|.:|||     |.:|.|  |.||.||.|:||:|  
Mouse   907 EETSVS----------AQAMQSQIG---RSEEEDDD-----DWDEEV--LEETALEGFSTPLD-- 949

  Fly   968 ENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAKALQEVVVTADQRK 1020
             .::::|||..|.:.:..:..:|.|||.||.:.|:.:|.:.||||...|:.|:
Mouse   950 -LDNSVDEYQFFTQALLTVQNRDAAWYQLLVAPLSEDQKRKLQEVYTLAEHRR 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 486/1016 (48%)
IBN_N 24..103 CDD:281761 42/79 (53%)
Ipo8NP_001074582.1 SXM1 15..995 CDD:227943 484/1006 (48%)
IBN_N 22..101 CDD:281761 41/78 (53%)
CAS_CSE1 <626..>869 CDD:281384 121/243 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..932 13/63 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 639 1.000 Domainoid score I167
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1142 1.000 Inparanoid score I214
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53555
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002119
OrthoInspector 1 1.000 - - otm42551
orthoMCL 1 0.900 - - OOG6_101190
Panther 1 1.100 - - O PTHR10997
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R599
SonicParanoid 1 1.000 - - X1573
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.860

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