DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msk and Ipo7

DIOPT Version :9

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001101015.1 Gene:Ipo7 / 308939 RGDID:1310849 Length:1038 Species:Rattus norvegicus


Alignment Length:1057 Identity:567/1057 - (53%)
Similarity:767/1057 - (72%) Gaps:35/1057 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAQKLTELLRATIDPNPEQRKAAEDQLAQIHKIIGFVPTILQIVMQTTVEQPVRQAGAVYLKNL 65
            |:...:.|.||.|:|  |..|:|||.||.:.||.:.||.|:|||.|...::.||||||.:||||:
  Rat     1 MDPNTIIEALRGTMD--PALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKNM 63

  Fly    66 INSSWSDHEAKPGEPIPFSIHEQDRAMIRGAIVDAIVHAPELIRVQLSVCVNHIIKSDFPGRWPQ 130
            |...|.|.||.||:..|::|.|:||..||..||:||:|:||||||||:.|::||||.|:|.||..
  Rat    64 ITQYWPDREATPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTA 128

  Fly   131 VVDSISIYLQNQDVNGWNGALVTMYQLVKTYEYKRHEERTPLNEAMNLLLPMIYQLMVRLLAEQS 195
            :||.|..|||:.:...|.|.|:.:|||||.||||:.|||:||..||...||::....::||::||
  Rat   129 IVDKIGFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPVLKDRFIQLLSDQS 193

  Fly   196 EQSVLLQKQILKIYYALTQYTLPLDLITKEIFSQWMEICRQVADRAVPDSS-HLDDDERTEFPYW 259
            :||||:||||.||:|||.||||||:||.::..::|:||.:.|.:|.||:.: .:::|:|.|.|:|
  Rat   194 DQSVLIQKQIFKIFYALVQYTLPLELINQQNLTEWVEILKTVVNRDVPNETLQVEEDDRPELPWW 258

  Fly   260 KTKKWALHIMVRMFERYGSPSNVVSEKYQKFAEWYLPTFSQGVLEVLLKILDQYRNRVYVSPRVL 324
            |.|||||||:.|:|||||||.| ||::|.:|||.:|..|:.||.:||||:|.||:.:.|::||||
  Rat   259 KCKKWALHILARLFERYGSPGN-VSKEYNEFAEVFLKAFAVGVQQVLLKVLYQYKEKQYMAPRVL 322

  Fly   325 TDVLNYLKNAVSHAYTWKLIKPHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDYA 389
            ...|||:...||||.|||.:|||:..:|||||||:|.:||:|:|||:.|||||||:|||:|||:.
  Rat   323 QQTLNYINQGVSHALTWKNLKPHIQGIIQDVIFPLMCYTDADEELWQEDPYEYIRMKFDVFEDFI 387

  Fly   390 TPVPAAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVLLKKASYRDQ 454
            :|..|||:||.:.|.|||.:|.|.|....||:|.||||.::|||||||||:||::||||..|:||
  Rat   388 SPTTAAQTLLFTACSKRKEVLQKTMGFCYQILTEPNADPRKKDGALHMIGSLAEILLKKKIYKDQ 452

  Fly   455 VESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQVLAEIMRLTTNALLTDKELPVKVEA 519
            :|.||..:|||.|.:..|:|||||||||||||:|:.|:.|.|...:.||...|:.|:|:||||||
  Rat   453 MEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPVKVEA 517

  Fly   520 AIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEICQ 584
            ||.||:.||:|::|.:|:...|:.:.:.||.|||||||:|||||:||::|.::|::.|:|.|:.|
  Rat   518 AIALQVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDLTNVIQKMICEYSEEVTPIAVEMTQ 582

  Fly   585 HLATTFSQVLES---EEGSDEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQHN 646
            |||.||:||:::   |||||:||:|||.:||||:|||||:|:|.::...|..|.:.|:|.:.|.:
  Rat   583 HLAMTFNQVIQTGPDEEGSDDKAVTAMGILNTIDTLLSVVEDHKEITQQLEGICLQVIGTVLQQH 647

  Fly   647 ITDFYEETFSLVYDLTAKAISPEMWQMLELIYQVFKKDGIDYFIDIMPALHNYVTVDTPAFLSNP 711
            :.:||||.|||.:.||.:.:||:|||:|.|:::||::||.|||.|:||.|||||||||...||:.
  Rat   648 VLEFYEEIFSLAHSLTCQQVSPQMWQLLPLVFEVFQQDGFDYFTDMMPLLHNYVTVDTDTLLSDT 712

  Fly   712 NRLLAILDMCKTMLTSSPGEDPECHAAKLMEVIILQCKGQ-IDSVIHMFVELALSRLTREVQSSE 775
            ..|..|..|||.:||...|||.|||||||:|||||||||: ||..|.:|||.||.||||||::||
  Rat   713 KYLEMIYSMCKKVLTGVAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSE 777

  Fly   776 LRTMCLQVVIAALYYNPQLLLSILDKMSQQNN-DSISAHFIKQWLHDTDCFLGIHDRKLCVLGLC 839
            ||||||||.||||||||.|||:.|:.:...|| :.::.|||.|||:|.|||||:||||:||||||
  Rat   778 LRTMCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLGLC 842

  Fly   840 TLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAYESRAQEE---EEDEEEEDGDDCEEALSSDE 901
            .||.: |..||||::|:|:|:||.||||:||||||...|:.|   ::|::.||.|:.|| |.|||
  Rat   843 ALIDM-EQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDDAEDDDETEE-LGSDE 905

  Fly   902 DDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDAEESVGDLNETGLESFTTPIDD 966
            ||:||...:||:.||:.|...|::..:|      :|||:             ||.||.::|.|||
  Rat   906 DDIDEDGQEYLEILAKQAGEDGDDEDWE------EDDAE-------------ETALEGYSTIIDD 951

  Fly   967 EENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAKALQEVVVTADQRKAAKESKLIEKQ 1031
            |:|  .:|||..||.:...:..::..||..||..|..||.|.||::...||||:||.|||:|||.
  Rat   952 EDN--PVDEYQIFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKH 1014

  Fly  1032 GGFAFPQTAVPTSFKFG 1048
            ||:.|....||:||.||
  Rat  1015 GGYKFSAPVVPSSFNFG 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 545/1017 (54%)
IBN_N 24..103 CDD:281761 41/78 (53%)
Ipo7NP_001101015.1 SXM1 15..997 CDD:227943 541/1007 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353308
Domainoid 1 1.000 638 1.000 Domainoid score I160
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4659
Inparanoid 1 1.050 1137 1.000 Inparanoid score I204
OMA 1 1.010 - - QHG53555
OrthoDB 1 1.010 - - D159062at2759
OrthoFinder 1 1.000 - - FOG0002119
OrthoInspector 1 1.000 - - oto95765
orthoMCL 1 0.900 - - OOG6_101190
Panther 1 1.100 - - LDO PTHR10997
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1573
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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