DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msk and ipo8

DIOPT Version :9

Sequence 1:NP_524780.1 Gene:msk / 44747 FlyBaseID:FBgn0026252 Length:1049 Species:Drosophila melanogaster
Sequence 2:XP_031754525.1 Gene:ipo8 / 100497558 XenbaseID:XB-GENE-494871 Length:1023 Species:Xenopus tropicalis


Alignment Length:1047 Identity:501/1047 - (47%)
Similarity:709/1047 - (67%) Gaps:54/1047 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAQKLTELLRATIDPNPEQRKAAEDQLAQIHKIIGFVPTILQIVMQTTVEQPVRQAGAVYLKNL 65
            |:..::.:.||.|||  |:.|.|||.:|.|.:|||.|.||:|||::...||.|||||.|:||||:
 Frog     1 MDPNRIIQALRGTID--PKMRLAAETELNQSYKIISFAPTLLQIIVSDQVEFPVRQAAAIYLKNM 63

  Fly    66 INSSWSDHEAKPGEPI-PFSIHEQDRAMIRGAIVDAIVHAPELIRVQLSVCVNHIIKSDFPGRWP 129
            ::..|.|.|.:|||.: ||:|||.||..||..||:.|:.:|:|:|.||::|:..|||.||||||.
 Frog    64 VSQYWPDREPQPGEVVFPFNIHENDRHQIRENIVEGIIRSPDLVRAQLTLCLRVIIKHDFPGRWT 128

  Fly   130 QVVDSISIYLQNQDVNGWNGALVTMYQLVKTYEYKRHEERTPLNEAMNLLLPMIYQLMVRLLAEQ 194
            .|||.|..|||.|:...|.|:|:.:||||||||||:.:||.||..||.:.||.:.|.:|.||.:.
 Frog   129 GVVDKIGFYLQQQNTTSWLGSLLCLYQLVKTYEYKKADERAPLIAAMQIFLPRLQQQIVHLLPDP 193

  Fly   195 SEQSVLLQKQILKIYYALTQYTLPLDLITKEIFSQWMEICRQVADRAV-PDSSHLDDDERTEFPY 258
            |..|||:|||||||:|||.||.|||.|:..::.:|||.|...:|||.| |::..:|:|:|.|..:
 Frog   194 SHYSVLMQKQILKIFYALIQYALPLQLVNNQMMTQWMGIFSAIADRDVPPETLQVDEDDRPELIW 258

  Fly   259 WKTKKWALHIMVRMFERYGSPSNVVSEKYQKFAEWYLPTFSQGVLEVLLKILDQYRNRVYVSPRV 323
            ||.||||||::.|:|||||||.:|..| |.:|:|::|.|::.|||:||||:|||:|.:.||:|||
 Frog   259 WKCKKWALHVITRLFERYGSPGSVTKE-YFEFSEYFLKTYAVGVLQVLLKVLDQHRQKHYVAPRV 322

  Fly   324 LTDVLNYLKNAVSHAYTWKLIKPHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDY 388
            |...||||...||||.|||.:||||..:.::||||:|.:.|.|::||:.|||||||:|||:||||
 Frog   323 LQQTLNYLNLGVSHAVTWKQLKPHMKGISEEVIFPLMCYRDEDEDLWQDDPYEYIRMKFDVFEDY 387

  Fly   389 ATPVPAAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVLLKKASYRD 453
            .:|..|||:||::..||||.:|||.|....||.|..:.|.::.|||||::|:||::||||:.|:|
 Frog   388 VSPATAAQNLLYTASKKRKEVLPKMMTFCYQIFTGTSVDPRKIDGALHVVGSLAEILLKKSVYKD 452

  Fly   454 QVESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQVLAEIMRLTTNALLTDKELPVKVE 518
            |:|..:..:|||.|.:..|::|||:|||||.|..::..|...|...::|...:|:.|||||||||
 Frog   453 QMEVFVQNHVFPLFMSDLGYLRARSCWVLHSFSTLKFHNEMNLRNGVQLAKKSLIEDKELPVKVE 517

  Fly   519 AAIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEIC 583
            |||.||..||:|..|.:|:...|:.:.:|||.|:|||||:|||||:||::|.:::::.|:|.::.
 Frog   518 AAIALQSLISNQSAAKEYMRLFIRPVMQELLHIVRETENDDLTNVIQKMICEYSQEVAPIAVDMT 582

  Fly   584 QHLATTFSQVLESEEGS--DEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQHN 646
            :||...|.:||:|:|..  ::|.:.||.:|:||:.:|:|:|:|.::...|..|.:.::|.:.|.:
 Frog   583 RHLTEIFVKVLQSDEYDEVEDKTVMAMGILHTIDIVLTVVEDHKEIKQQLEGICLQIIGLVLQKH 647

  Fly   647 ITDFYEETFSLVYDLTAKAISPEMWQMLELIYQVFKKDGIDYFIDIMPALHNYVTVDTPAFLSNP 711
            |.:||||..||.|.||.:.|||:|||:|.::::||:||..:||.|:||.||||:||||...||||
 Frog   648 IIEFYEEILSLSYSLTNQTISPQMWQLLGILFEVFQKDCYEYFTDMMPLLHNYITVDTNTLLSNP 712

  Fly   712 NRLLAILDMCKTMLTSSPGEDPECHAAKLMEVIILQCKGQ-IDSVIHMFVELALSRLTREVQSSE 775
            ..:..|..|||.:||...|||.|||||||:|||||||:|: ||..|.:|||..|.||||.|:|||
 Frog   713 KNVEIIYTMCKKVLTGDAGEDAECHAAKLLEVIILQCRGRGIDQCIPLFVEAVLERLTRGVKSSE 777

  Fly   776 LRTMCLQVVIAALYYNPQLLLSILDKMS-QQNNDSISAHFIKQWLHDTDCFLGIHDRKLCVLGLC 839
            |||||||||||.|||||.|||:.|::|. ..:::.|:|.||.||::|||||||:||||:|::||.
 Frog   778 LRTMCLQVVIACLYYNPSLLLNTLEQMCFPHSSEPITAQFINQWVNDTDCFLGLHDRKICIIGLS 842

  Fly   840 TLISLGEAKPQVLSEVAGKIVPALILLFDGLKRA----------YESRAQEEEEDEEEEDGDDCE 894
            .|:.|.. :|..:|.||..:||:::|||.||::.          ..||..:.|.:|.||...|.|
 Frog   843 ILMELPN-RPPAVSAVASVLVPSILLLFLGLRQVCATRDHSDHRAPSRVPKAEIEESEEIASDEE 906

  Fly   895 EALSSDEDDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDAEESVGDLNETGLES 959
            ||                             :|..::....:|..:.|.|.::.|  |.||.||.
 Frog   907 EA-----------------------------NGQAMQQNTGEDAEEEDEDWDDEV--LEETALEG 940

  Fly   960 FTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAKALQEVVVTADQRKAAKE 1024
            |:||:|.|:   |:|||..|...:..:.::|..||.||...|:.:|.|.|||:...::||:.|..
 Frog   941 FSTPLDCED---ALDEYQFFTNALLNVQSRDAPWYHLLMEKLSNDQKKQLQEIYTISEQRRNAAV 1002

  Fly  1025 SKLIEKQ 1031
            |:..|:|
 Frog  1003 SRKTEQQ 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mskNP_524780.1 SXM1 4..1013 CDD:227943 494/1024 (48%)
IBN_N 24..103 CDD:281761 43/79 (54%)
ipo8XP_031754525.1 SXM1 15..883 CDD:227943 449/871 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 641 1.000 Domainoid score I166
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1142 1.000 Inparanoid score I216
OMA 1 1.010 - - QHG53555
OrthoDB 1 1.010 - - D159062at2759
OrthoFinder 1 1.000 - - FOG0002119
OrthoInspector 1 1.000 - - otm47650
Panther 1 1.100 - - O PTHR10997
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R599
SonicParanoid 1 1.000 - - X1573
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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