DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3719 and RIM1

DIOPT Version :9

Sequence 1:NP_651990.1 Gene:CG3719 / 44736 FlyBaseID:FBgn0024986 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_009958.2 Gene:RIM1 / 850395 SGDID:S000007222 Length:135 Species:Saccharomyces cerevisiae


Alignment Length:16 Identity:5/16 - (31%)
Similarity:10/16 - (62%) Gaps:0/16 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LTPKMLELLENSNEID 100
            |..|.:.||:|..:::
Yeast   108 LVQKDINLLKNGKKLE 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3719NP_651990.1 TRX_family 58..150 CDD:239245 5/16 (31%)
RIM1NP_009958.2 SSB 19..116 CDD:395349 2/7 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.75 Normalized mean entropy S660
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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