DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3719 and ty2

DIOPT Version :10

Sequence 1:NP_651990.1 Gene:CG3719 / 44736 FlyBaseID:FBgn0024986 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_175021.2 Gene:ty2 / 840939 AraportID:AT1G43560 Length:167 Species:Arabidopsis thaliana


Alignment Length:144 Identity:43/144 - (29%)
Similarity:76/144 - (52%) Gaps:20/144 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SIGAKSRGQRMAPQAARGTQKYLSQSQHLHKMLVIKDHYEFDQKVINSDNPVIVNFHAEWCDPCK 83
            |:.:.|...|.||...|..:|....|              ||..:.|||.||:|:|:|.||.||:
plant    42 SVQSPSSSTRFAPLTVRAAKKQTFNS--------------FDDLLQNSDKPVLVDFYATWCGPCQ 92

  Fly    84 ILTPKMLELLENSNEIDLAVIDVETNL--DLVETFEVKAVPAVLAFRNGVVVDKFIGLVDANSIE 146
            ::.|.:.|:.|...:| :||:.::|..  .|...::::|:|..:.|::|.:.|:|.|.:.||.  
plant    93 LMVPILNEVSETLKDI-IAVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQ-- 154

  Fly   147 TLIDKLKRKQQQKQ 160
             |:::::...|.||
plant   155 -LVERIENSLQVKQ 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3719NP_651990.1 CnoX 58..150 CDD:442352 32/93 (34%)
ty2NP_175021.2 CnoX 64..163 CDD:442352 33/116 (28%)

Return to query results.
Submit another query.