DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3719 and TDX

DIOPT Version :9

Sequence 1:NP_651990.1 Gene:CG3719 / 44736 FlyBaseID:FBgn0024986 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_188415.2 Gene:TDX / 821056 AraportID:AT3G17880 Length:380 Species:Arabidopsis thaliana


Alignment Length:80 Identity:23/80 - (28%)
Similarity:41/80 - (51%) Gaps:1/80 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VIVNFHAEWCDPCKILTPKMLELLENSNEIDLAVIDVETNLDLVETFEVKAVPAVLAFRNGVVVD 134
            :|:.|.|.||.||:.::|....|....:.:....:|::...|:..::.:.:||.....|:|..||
plant   295 LILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVD 359

  Fly   135 KFIGLVDANSIETLI 149
            |.:| .|..|:|..|
plant   360 KVVG-ADKGSLEQKI 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3719NP_651990.1 TRX_family 58..150 CDD:239245 23/80 (29%)
TDXNP_188415.2 Hip_N 6..44 CDD:271228
TPR repeat 112..140 CDD:276809
PLN03088 117..>213 CDD:215568
TPR repeat 145..175 CDD:276809
TPR repeat 180..206 CDD:276809
PRK14552 <200..256 CDD:237753
TRX_family 292..374 CDD:239245 23/80 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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