DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3719 and Mad

DIOPT Version :9

Sequence 1:NP_651990.1 Gene:CG3719 / 44736 FlyBaseID:FBgn0024986 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001259992.1 Gene:Mad / 33529 FlyBaseID:FBgn0011648 Length:525 Species:Drosophila melanogaster


Alignment Length:69 Identity:18/69 - (26%)
Similarity:36/69 - (52%) Gaps:13/69 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 NSNEIDLAVIDVETN-------LDLVETFEVKAVPAVLAFRNGVVVDKFIGLVDANSIETLIDKL 152
            :||.:|  ..|||:|       |..:.:|...||..:|.::.|...:|:.    ..::::|:.||
  Fly    67 SSNRMD--TDDVESNTSSAMSTLGSLFSFTSPAVKKLLGWKQGDEEEKWA----EKAVDSLVKKL 125

  Fly   153 KRKQ 156
            |:::
  Fly   126 KKRK 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3719NP_651990.1 TRX_family 58..150 CDD:239245 15/61 (25%)
MadNP_001259992.1 MH1_SMAD_1_5_9 93..216 CDD:199814 10/41 (24%)
MH2_SMAD_1_5_9 325..525 CDD:199822
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.75 Normalized mean entropy S660
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

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