DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment san and CWC24

DIOPT Version :9

Sequence 1:NP_524779.1 Gene:san / 44724 FlyBaseID:FBgn0024188 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_013427.1 Gene:CWC24 / 851033 SGDID:S000004315 Length:259 Species:Saccharomyces cerevisiae


Alignment Length:88 Identity:21/88 - (23%)
Similarity:36/88 - (40%) Gaps:17/88 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 IMNFAEKDGNFDSIFLHVQINNNGAI----EFYKKFGFEIVD--TKEQY--YKRIEPADAHVLQK 152
            :|:.| |.||  |..|.:...|.|.:    |...|:...:.|  |||..  ::|.|      |.:
Yeast    42 LMSLA-KSGN--SRTLQLSHENEGKLQKKGEDLDKYTLTVNDDSTKEDLLNFERKE------LAE 97

  Fly   153 TLRRTAPNSNSTATSTTANSNSR 175
            ..::..|:.::......:..|.|
Yeast    98 KAKKRRPSDDNELVLNMSGKNKR 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanNP_524779.1 RimI <27..145 CDD:223532 17/56 (30%)
Acetyltransf_1 50..130 CDD:278980 11/37 (30%)
CWC24NP_013427.1 COG5152 1..259 CDD:227481 21/88 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2079
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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