DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment san and MCC1

DIOPT Version :10

Sequence 1:NP_524779.1 Gene:san / 44724 FlyBaseID:FBgn0024188 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_186948.1 Gene:MCC1 / 821166 AraportID:AT3G02980 Length:247 Species:Arabidopsis thaliana


Alignment Length:158 Identity:37/158 - (23%)
Similarity:73/158 - (46%) Gaps:23/158 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SIELGDVTPHNIKQLKKLNTVVFPVSYNDKFYVDVLEAGELAKLAY--------YNDIVVGAVCC 61
            ||....:.|:::.:|::::..:||:.|..:|:..|:...::...|.        ::|.::|.|..
plant    24 SIHYRPINPNDLDRLEQIHRDIFPIKYESEFFQSVVNGVDIVSWAAVDRSRPDDHSDELIGFVTA 88

  Fly    62 RI--------------DNTENQRRL-YIMTLGCLSPYRRLGIGTVMFEHIMNFAEKDGNFDSIFL 111
            :.              |:::.:..| ||:|||.:..||..||...:...::.:|........::|
plant    89 KFVLAKDSEIDDLIHYDSSKGEETLIYILTLGVVETYRNRGIAMSLISEVIKYASGLSVCRGVYL 153

  Fly   112 HVQINNNGAIEFYKKFGFEIVDTKEQYY 139
            ||..:||.||..||:..|..|.....:|
plant   154 HVIAHNNAAICLYKRLMFRCVRRLHGFY 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanNP_524779.1 Acetyltransf_1 24..129 CDD:395465 30/127 (24%)
MCC1NP_186948.1 yhbS 27..196 CDD:442387 35/155 (23%)
RimI 109..188 CDD:440224 23/73 (32%)

Return to query results.
Submit another query.