DRSC/TRiP Functional Genomics Resources

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Protein Alignment san and Rnf113a1

DIOPT Version :9

Sequence 1:NP_524779.1 Gene:san / 44724 FlyBaseID:FBgn0024188 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_705723.1 Gene:Rnf113a1 / 69942 MGIID:1917192 Length:341 Species:Mus musculus


Alignment Length:74 Identity:15/74 - (20%)
Similarity:25/74 - (33%) Gaps:22/74 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YNDKFYVDVLEAGE----------LAKLAYYNDIVVGA---VC--CRIDNTENQRRLYI---MTL 77
            |.|:.|    |.|.          :.:..:.|.:|...   .|  |.:.:.....|.|:   .|.
Mouse   242 YEDENY----EVGSDDEEIPFKCFICRQTFQNPVVTKCRHYFCERCALQHFRTTSRCYVCDQQTN 302

  Fly    78 GCLSPYRRL 86
            |..:|.:.|
Mouse   303 GVFNPAKEL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanNP_524779.1 RimI <27..145 CDD:223532 15/74 (20%)
Acetyltransf_1 50..130 CDD:278980 10/45 (22%)
Rnf113a1NP_705723.1 COG5152 58..320 CDD:227481 15/74 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2079
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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