DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment san and Atac2

DIOPT Version :9

Sequence 1:NP_524779.1 Gene:san / 44724 FlyBaseID:FBgn0024188 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_609889.1 Gene:Atac2 / 35113 FlyBaseID:FBgn0032691 Length:774 Species:Drosophila melanogaster


Alignment Length:151 Identity:41/151 - (27%)
Similarity:66/151 - (43%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TRSSIELGDVTPHNIKQLKK-LNTVVFPVSYNDKFYVDVLEA---GELAKLAYYNDIVVGAVCCR 62
            |||:|:...|.|.:|..:.. |.:..:|       .:||.|.   .:.:.:|.|..:|:|  |..
  Fly   626 TRSTIDFCFVRPQHIPAVNALLQSTFWP-------NIDVSECLSYPDYSVVALYKKLVIG--CGF 681

  Fly    63 IDNTENQRRLYIMTLGCLSPYRRLGIGTVMFEH-IMNFAEKDGNFDSIFLHVQINNNGAIEFYKK 126
            :.........||..:.....::|.||.:.|..| |.....||     |.|||.. .|.|:..|:|
  Fly   682 LVPDVGYNEAYISFMAVRPCWQRSGIASFMLYHLIQTCMSKD-----ITLHVSA-TNAAVMLYQK 740

  Fly   127 FGFEIVDTKEQYYKRIEPADA 147
            |||::.:....:|.:..|.|:
  Fly   741 FGFKMEEIILDFYDKYLPLDS 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanNP_524779.1 RimI <27..145 CDD:223532 31/121 (26%)
Acetyltransf_1 50..130 CDD:278980 24/80 (30%)
Atac2NP_609889.1 PHD 14..63 CDD:214584
rimI 639..753 CDD:273701 32/128 (25%)
Acetyltransf_1 676..744 CDD:278980 23/75 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0456
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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