DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment san and natc-2

DIOPT Version :9

Sequence 1:NP_524779.1 Gene:san / 44724 FlyBaseID:FBgn0024188 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_504411.1 Gene:natc-2 / 178916 WormBaseID:WBGene00015074 Length:278 Species:Caenorhabditis elegans


Alignment Length:124 Identity:36/124 - (29%)
Similarity:56/124 - (45%) Gaps:8/124 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ELAKLAY--YNDIVVGAVCCRID-NTENQRRLYIMTLGCLSPYRRLGIGTVMFEHIMNFAEKDGN 105
            |...|||  .|:..:|||.|::: :...:.:.|:..|......|||||||.:....::..:..| 
 Worm   135 EYCFLAYDQTNNTYIGAVLCKLELDMYGRCKGYLAMLAVDESCRRLGIGTRLVRRALDAMQSKG- 198

  Fly   106 FDSIFLHVQINNNGAIEFYKKFGFEIVDTKEQYYKRIEPADAHVLQK--TLRRTAPNSN 162
            .|.|.|..:::|..|...|...||.......:||  :...||..|:.  |.||....:|
 Worm   199 CDEIVLETEVSNKNAQRLYSNLGFIRQKRLLKYY--LNGGDAFRLKLIFTSRRVRSLNN 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanNP_524779.1 RimI <27..145 CDD:223532 29/103 (28%)
Acetyltransf_1 50..130 CDD:278980 23/82 (28%)
natc-2NP_504411.1 RimI 94..243 CDD:223532 32/110 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0456
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.