DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and AT1G01640

DIOPT Version :9

Sequence 1:NP_001163186.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_171670.1 Gene:AT1G01640 / 839534 AraportID:AT1G01640 Length:207 Species:Arabidopsis thaliana


Alignment Length:109 Identity:32/109 - (29%)
Similarity:53/109 - (48%) Gaps:9/109 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FQTNMVTSFRHLRDEKSFTDVTL--ACEGQTCKAHKMVLSACSPYFKALLEENPSK---HPIIIL 74
            |...:|.||:    |:..|||.:  ..|......||.||:|.|..|:.:|:.:..|   ...|.|
plant    10 FLGGLVVSFK----EQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITL 70

  Fly    75 KDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
            .|:|:..|:::|||:|:|.:.....|..:....||:..:..|.:
plant    71 PDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQD 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_001163186.1 BTB_POZ_BAB-like 32..115 CDD:349624 26/87 (30%)
AT1G01640NP_171670.1 BTB_POZ_ZBTB_KLHL-like 23..107 CDD:349497 26/83 (31%)
BACK 128..>160 CDD:350515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2685
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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