DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and AT3G56230

DIOPT Version :9

Sequence 1:NP_001163186.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_191182.1 Gene:AT3G56230 / 824789 AraportID:AT3G56230 Length:282 Species:Arabidopsis thaliana


Alignment Length:111 Identity:30/111 - (27%)
Similarity:57/111 - (51%) Gaps:11/111 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FQTNMVTSFRHLRDEKSFTDVTL--ACEGQTCKAHKMVLSACSPYFKALLEENPSK---HPIIIL 74
            |.::.|:.|:    |:...|:.|  ..:|....||:.:|::.|..||.:|:.:..|   ...|.|
plant    97 FLSSFVSGFK----EQLHADILLKPGDDGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITL 157

  Fly    75 KDVSYIHLQAILEFMYAGEV--NVSQEQLPAFLKTADRLKVKGLAE 118
            ::::...|||:|||:|.|.:  :..::.:.|....||:..:..|.|
plant   158 QELNSEQLQALLEFLYTGTLASDKLEKNVYALFIAADKYMIHYLQE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_001163186.1 BTB_POZ_BAB-like 32..115 CDD:349624 24/89 (27%)
AT3G56230NP_191182.1 BTB 105..212 CDD:366225 28/103 (27%)
BACK 212..268 CDD:391941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2685
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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