DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and AT2G40450

DIOPT Version :9

Sequence 1:NP_001163186.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_181577.1 Gene:AT2G40450 / 818639 AraportID:AT2G40450 Length:209 Species:Arabidopsis thaliana


Alignment Length:109 Identity:29/109 - (26%)
Similarity:51/109 - (46%) Gaps:13/109 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FRHLRDEKSFTDVTLAC----EGQTCKAHKMVLSACSPYFKALLEENPSK-----HPIIILKDVS 78
            |:.|.:|:...||.|..    |..:..|||:||.|.|..||.:||.:..|     ...:.|.::.
plant    14 FKKLLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVTLSEMK 78

  Fly    79 YIHLQAILEFMYAGEVNVSQEQLP----AFLKTADRLKVKGLAE 118
            :..|:|.:||:|..:.::....|.    :....||:.::..|.:
plant    79 HEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRD 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_001163186.1 BTB_POZ_BAB-like 32..115 CDD:349624 25/95 (26%)
AT2G40450NP_181577.1 BTB 14..129 CDD:395526 29/109 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2685
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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