DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and zbtb43

DIOPT Version :10

Sequence 1:NP_524778.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001072352.1 Gene:zbtb43 / 779805 XenbaseID:XB-GENE-5880504 Length:465 Species:Xenopus tropicalis


Alignment Length:115 Identity:28/115 - (24%)
Similarity:58/115 - (50%) Gaps:5/115 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMSSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYF-KALLEE 64
            |.:....|.:::.:|.:.::......|......|:::..:|...:|||.||:|.|||| ..:|.:
 Frog     1 MEAGSGAFRVEFPNFSSTILAKLNQQRQLGQLCDISVVVQGHLFRAHKAVLAASSPYFCDQVLLK 65

  Fly    65 NPSKHPIIILKDVSYIHL-QAILEFMYAGEVNVSQEQLPAFLKTADRLKV 113
            |..:   ::|.||....: :.||...|.|.:::...::.::|..|..|::
 Frog    66 NSRR---VVLPDVMNPRVFENILLSSYTGRLSLPAHEIVSYLTAASFLQM 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_524778.1 BTB_POZ_BAB-like 32..115 CDD:349624 24/84 (29%)
zbtb43NP_001072352.1 BTB_POZ_ZBTB43 8..128 CDD:349536 27/108 (25%)
C2H2 Zn finger 374..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
zf-H2C2_2 412..435 CDD:463886
C2H2 Zn finger 428..445 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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