DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and bath-23

DIOPT Version :9

Sequence 1:NP_001163186.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_494522.1 Gene:bath-23 / 190086 WormBaseID:WBGene00021727 Length:243 Species:Caenorhabditis elegans


Alignment Length:118 Identity:35/118 - (29%)
Similarity:51/118 - (43%) Gaps:22/118 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DQQFFLKWNDFQTNMV-------TSFRHLRDE--KSFTDVTLACEGQTCKAHKMVLSACSPYFKA 60
            |...|:|.....|.|:       .||    ||  :.|:||.||.|.:.....|..|::.|.|||:
 Worm    85 DDSLFVKATVKITKMIGIPRKKLKSF----DESVEEFSDVILAVEDEKFYVLKKFLASHSSYFKS 145

  Fly    61 LL-----EENPSKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTA 108
            |.     |...|:   |.|.:::....|.:||.:| ||..:..|.:...|..|
 Worm   146 LFFGSFAEAEKSE---ITLSEINSAGFQCLLEVLY-GESAIDDENVDGILHLA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_001163186.1 BTB_POZ_BAB-like 32..115 CDD:349624 26/82 (32%)
bath-23NP_494522.1 MATH <42..96 CDD:351761 3/10 (30%)
BTB 115..208 CDD:366225 26/84 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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