DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-1 and AT3G58730

DIOPT Version :9

Sequence 1:NP_651987.1 Gene:Vha36-1 / 44702 FlyBaseID:FBgn0022097 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_191432.1 Gene:AT3G58730 / 825042 AraportID:AT3G58730 Length:261 Species:Arabidopsis thaliana


Alignment Length:261 Identity:129/261 - (49%)
Similarity:184/261 - (70%) Gaps:15/261 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKD-RLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKE 64
            |:|:: ||.:.|:.....:|||||.||.:||.|||||:|||.::||.:|.||:..|..|||:||.
plant     1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDMMKT 65

  Fly    65 AAFSLAEAKFTSGD-INQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGLARGG 128
            ::|:|.|.|:.:|| :..|||:||.:|.:|:|::.:|:|||.||.|:.:.:|....:|.||||||
plant    66 SSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLARGG 130

  Fly   129 QQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRTLAYIISELDE 193
            ||:...:..|..|:::|||||||||||:||||.||.|||||||:|:|:.|:::.|::||..||||
plant   131 QQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPKLENTISYIKGELDE 195

  Fly   194 LEREEFYRLKKIQD-KKREA-RIKADAKK-AE-------LLQQGIDVRQQANIL---DEGDDDVL 245
            ||||:|:||||||. |:||. |..|:||: ||       .:|:||.:....|.|   .|.|.|::
plant   196 LEREDFFRLKKIQGYKRREVERQAANAKEFAEEMVLEDISMQRGISINAARNFLVGGAEKDSDII 260

  Fly   246 F 246
            |
plant   261 F 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-1NP_651987.1 ATP-synt_D 17..207 CDD:396399 105/190 (55%)
AT3G58730NP_191432.1 ATP-synt_D 16..209 CDD:396399 105/192 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 217 1.000 Domainoid score I740
eggNOG 1 0.900 - - E1_COG1394
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5783
Inparanoid 1 1.050 230 1.000 Inparanoid score I1145
OMA 1 1.010 - - QHG60833
OrthoDB 1 1.010 - - D1313938at2759
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm3090
orthoMCL 1 0.900 - - OOG6_101069
Panther 1 1.100 - - LDO PTHR11671
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2286
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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