DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-1 and atp6v1d

DIOPT Version :9

Sequence 1:NP_651987.1 Gene:Vha36-1 / 44702 FlyBaseID:FBgn0022097 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001017075.1 Gene:atp6v1d / 549829 XenbaseID:XB-GENE-973447 Length:247 Species:Xenopus tropicalis


Alignment Length:249 Identity:175/249 - (70%)
Similarity:210/249 - (84%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65
            ||||||:.:||||.||.:|||||.|||.|..|||||:|||.||||.||.||||||.|||:||:||
 Frog     1 MSGKDRIEVFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTMRFRQILKKIIETKMLMGEVMREA 65

  Fly    66 AFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGLARGGQQ 130
            ||||||||||:||.:..|:|||.|||:|:|.|:||||||||||||.||:|.|:|||.||||||:|
 Frog    66 AFSLAEAKFTAGDFSTTVIQNVNKAQVKVRAKRDNVAGVTLPVFEHYQEGGDSYELTGLARGGEQ 130

  Fly   131 LAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRTLAYIISELDELE 195
            |||||:||..||:|||||||||||||||||.|||||||||||||||||:|:|||:||::||||.|
 Frog   131 LAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPKIERTLSYIVTELDERE 195

  Fly   196 REEFYRLKKIQDKKREARIKADAKKA--ELLQQGIDVRQQANIL-DEGDDDVLF 246
            |||||||||||:||:..|.||:.::|  :.:..|   .:.||:| ::.|:|:||
 Frog   196 REEFYRLKKIQEKKKIIREKAEKEQAKWKKVSGG---AEPANLLAEDRDEDLLF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-1NP_651987.1 ATP-synt_D 17..207 CDD:396399 148/189 (78%)
atp6v1dNP_001017075.1 ATP-synt_D 17..202 CDD:376621 143/184 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 294 1.000 Domainoid score I1476
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5783
Inparanoid 1 1.050 334 1.000 Inparanoid score I2370
OMA 1 1.010 - - QHG60833
OrthoDB 1 1.010 - - D1313938at2759
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm48055
Panther 1 1.100 - - LDO PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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