DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-1 and vma8

DIOPT Version :9

Sequence 1:NP_651987.1 Gene:Vha36-1 / 44702 FlyBaseID:FBgn0022097 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_588513.1 Gene:vma8 / 2539581 PomBaseID:SPCC965.03 Length:285 Species:Schizosaccharomyces pombe


Alignment Length:235 Identity:116/235 - (49%)
Similarity:165/235 - (70%) Gaps:3/235 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65
            |:.|.|..:||:|.....||.||.|||.||.|||:|::||:.|||.|:..|.:.|..||.||:.|
pombe     1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGRVMQIA 65

  Fly    66 AFSLAEAKFTSG-DINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGS-DTYELAGLARGG 128
            |||:||..|..| :||..:.|:|.:.::::|:|::|::||.||.||...|.| |.::|.||.:||
pombe    66 AFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDESIDDFQLTGLGKGG 130

  Fly   129 QQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRTLAYIISELDE 193
            ||:.|.::.|:.||:.||:|||.|::||.|.:|:::||||||:|||:||||::.|:.||.|||:|
pombe   131 QQIQKARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVNSIEHIIIPRLENTIKYIESELEE 195

  Fly   194 LEREEFYRLKKIQDKKREARIKADAKKAELLQQGIDVRQQ 233
            ||||:|.||||:|..|..|. |||:...|..|.|.:..||
pombe   196 LEREDFTRLKKVQKTKENAE-KADSVTKEEHQGGSNTLQQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-1NP_651987.1 ATP-synt_D 17..207 CDD:396399 99/191 (52%)
vma8NP_588513.1 NtpD 5..217 CDD:224312 106/212 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 197 1.000 Domainoid score I678
eggNOG 1 0.900 - - E1_COG1394
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5783
Inparanoid 1 1.050 218 1.000 Inparanoid score I912
OMA 1 1.010 - - QHG60833
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm47147
orthoMCL 1 0.900 - - OOG6_101069
Panther 1 1.100 - - LDO PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
TreeFam 1 0.960 - -
1413.860

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