DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-1 and vha-14

DIOPT Version :9

Sequence 1:NP_651987.1 Gene:Vha36-1 / 44702 FlyBaseID:FBgn0022097 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_499094.1 Gene:vha-14 / 176338 WormBaseID:WBGene00010130 Length:257 Species:Caenorhabditis elegans


Alignment Length:252 Identity:157/252 - (62%)
Similarity:195/252 - (77%) Gaps:8/252 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEAAF 67
            ||||:.:||||.||.|||.||.||||||.|||||||||.:|||.||.||:|.|.|||:|||||||
 Worm     5 GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVMKEAAF 69

  Fly    68 SLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGLARGGQQLA 132
            ||||||||:||.:..|:|||::||.::|.||:||.||.||||::||||.|.|:|.||.:||..:|
 Worm    70 SLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDLTGLGKGGANIA 134

  Fly   133 KLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRTLAYIISELDELERE 197
            :|||||..|::||||||:|||.|:||||.||:||||||||||||||||:.||.||::||||:|||
 Worm   135 RLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIENTLTYIVTELDEMERE 199

  Fly   198 EFYRLKKIQDKKREARIKADAKKA-ELLQQGIDVRQQ-----ANILDEGDDD--VLF 246
            ||:|:||||..|::.:.:..|:|| |....|.|....     .|:|...:|:  |||
 Worm   200 EFFRMKKIQANKKKLKEQEAAQKALEGPGPGEDAAHSENNPPRNLLASEEDNLPVLF 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-1NP_651987.1 ATP-synt_D 17..207 CDD:396399 133/189 (70%)
vha-14NP_499094.1 ATP-synt_D 19..208 CDD:280060 132/188 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167106
Domainoid 1 1.000 276 1.000 Domainoid score I923
eggNOG 1 0.900 - - E1_COG1394
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5783
Inparanoid 1 1.050 303 1.000 Inparanoid score I1606
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60833
OrthoDB 1 1.010 - - D1313938at2759
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm14196
orthoMCL 1 0.900 - - OOG6_101069
Panther 1 1.100 - - LDO PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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