DRSC/TRiP Functional Genomics Resources

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Protein Alignment ergic53 and AT1G53060

DIOPT Version :9

Sequence 1:NP_524776.1 Gene:ergic53 / 44679 FlyBaseID:FBgn0035909 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_175714.1 Gene:AT1G53060 / 841740 AraportID:AT1G53060 Length:242 Species:Arabidopsis thaliana


Alignment Length:258 Identity:63/258 - (24%)
Similarity:92/258 - (35%) Gaps:61/258 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSEATGNLSPGAVGVHRRFEYKYSFKPPYLAQKDGTVPFWEYGGNAIASSESVRVAPSLRSQKGA 81
            :||..|....||:|:.|                 ..|||..  |.||..: .|...||  |...:
plant    10 ASEPDGMSKSGAIGLSR-----------------DNVPFSH--GRAIFIN-PVPFKPS--STSSS 52

  Fly    82 IWTKSQTNFDWWDVEIVFRVTGRGRIGADGLAFWYTTEKGDYNGPVFGSS-----DRW-NG---- 136
            ::: .:|:|       .|.::.|.:....|....:.....|.|....|..     :|: ||    
plant    53 VYS-FKTSF-------YFVISPRPKNPNPGHGLAFIIVPNDRNDSASGLGYLSLVNRFSNGNPKN 109

  Fly   137 --LAIMFDSFD-------NDNK---HNNPYISAVLNDGTKLYDHAEDGTTQLLSGCLRDFRNKPF 189
              .|:.||.|.       |||.   :||...|.|.......|....:|..:.|   .::.:....
plant   110 HLFAVEFDVFKDKSLGDINDNHIGINNNSVNSTVSKKAGYWYQSKIEGKNRWL---FKELKLSGN 171

  Fly   190 PTRARIEYYNNVLTVMIHNGMSNNNDDYELC-LRAD--GVNLPKNGYFGISAATGGLADDHDV 249
            ..||.|||.|..:||.|  |.|.......|. .|.|  .|.|.|. |.|.:.:.|...:.|::
plant   172 GYRAWIEYENGKVTVTI--GRSQEKPKRPLIEARVDLSKVFLEKM-YVGFAGSMGRGVERHEI 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ergic53NP_524776.1 lectin_ERGIC-53_ERGL 33..258 CDD:173890 57/242 (24%)
AT1G53060NP_175714.1 lectin_legume_LecRK_Arcelin_ConA 1..239 CDD:173887 63/258 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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