DRSC/TRiP Functional Genomics Resources

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Protein Alignment ergic53 and LMAN1

DIOPT Version :9

Sequence 1:NP_524776.1 Gene:ergic53 / 44679 FlyBaseID:FBgn0035909 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_005561.1 Gene:LMAN1 / 3998 HGNCID:6631 Length:510 Species:Homo sapiens


Alignment Length:520 Identity:214/520 - (41%)
Similarity:319/520 - (61%) Gaps:30/520 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPTFLAILCFLAWNPSSEATGNLSPGAVGVHRRFEYKYSFKPPYLAQKDGTVPFWEYGGNAIAS 65
            :||.|.|:|..|......:..|. .|.....|||||||||||.|:|.|.|||||||.:.||||.|
Human    13 VRPLFCALLLSLGRFVRGDGVGG-DPAVALPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPS 76

  Fly    66 SESVRVAPSLRSQKGAIWTKSQTNFDWWDVEIVFRVTGRGRIGADGLAFWYTTEKGDYNGPVFGS 130
            |:.:||||||:||:|::|||::..|:.|:||:.|||||||||||||||.||...:| ..||||||
Human    77 SDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYAENQG-LEGPVFGS 140

  Fly   131 SDRWNGLAIMFDSFDNDNKHNNPYISAVLNDGTKLYDHAEDGTTQLLSGCLRDFRNKPFPTRARI 195
            :|.|||:.|.|||||||.|.|||.|..:.|:|...|||..||.:|.|:.|.|||||||:|.||:|
Human   141 ADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRAKI 205

  Fly   196 EYYNNVLTVMIHNGMSNNNDDYELCLRADGVNLPKNGYFGISAATGGLADDHDVFHFLTTSLHAA 260
            .||.|.|||||:||.:.:.:|||.|.:.:.:.:|..|:||||||||||||||||..|||..|...
Human   206 TYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLTEP 270

  Fly   261 GQVQEQPKVE----NQEKLTQEYKEYQDKLEKQKQEYKKDHPDEHKDEEDWEEFYESENQRELRQ 321
            |:....|..|    .:||..:|::.:|.:|:|:|:|::|.|||  ...:..||.:||...|||||
Human   271 GKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPD--LQGQPAEEIFESVGDRELRQ 333

  Fly   322 IWQGQSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPAAGGVPQQQLPVGAVSRSDVD 386
            :::||::|...:::|:|::|.|:..|...:|.::....:     ...|:|.|.   |.:::.::|
Human   334 VFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISK-----RGAGMPGQH---GQITQQELD 390

  Fly   387 LLLTNQNMLLSSIREIRQLVGDINVRTDNIQTNQKHAPTAQIQSTGYDVQTLIAEMRDGMNQVKQ 451
            .::..|:.:|..:.|::..:.:    |..:.:..:|..:|   ...|:......::::.::.||:
Human   391 TVVKTQHEILRQVNEMKNSMSE----TVRLVSGMQHPGSA---GGVYETTQHFIDIKEHLHIVKR 448

  Fly   452 GITHVGQRLAAPQGAAQVANCPT----GNCVGVTLFLSVTVVQLLLVFIYNVFKNRSEAQAKKFY 512
            .|.::.||   ...:.:...||.    .:|:....|:...|||.:|...|.:::::.||.||||:
Human   449 DIDNLVQR---NMPSNEKPKCPELPPFPSCLSTVHFIIFVVVQTVLFIGYIMYRSQQEAAAKKFF 510

  Fly   513  512
            Human   511  510

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ergic53NP_524776.1 lectin_ERGIC-53_ERGL 33..258 CDD:173890 139/224 (62%)
LMAN1NP_005561.1 lectin_ERGIC-53_ERGL 44..268 CDD:173890 139/224 (62%)
Carbohydrate binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00658 251..253 1/1 (100%)
Mediates interaction with RAB3GAP1, RAB3GAP2 and UBXN6. /evidence=ECO:0000269|PubMed:22337587 499..510 5/10 (50%)