DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ergic53 and Lman1l

DIOPT Version :9

Sequence 1:NP_524776.1 Gene:ergic53 / 44679 FlyBaseID:FBgn0035909 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_017451046.1 Gene:Lman1l / 300743 RGDID:1310538 Length:631 Species:Rattus norvegicus


Alignment Length:503 Identity:164/503 - (32%)
Similarity:244/503 - (48%) Gaps:67/503 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TGNLSPG------AVGVH----------RRFEYKYSFKPPYLAQKDGTVPFWEYGGNAIASSESV 69
            ||.|||.      .:.:|          ||||||.|||.|.||.....:|||.:.|:||...|.|
  Rat    51 TGGLSPSLCLLSLLLALHSAERSYPPPQRRFEYKLSFKGPRLAVPGAGIPFWSHHGDAIPGLEEV 115

  Fly    70 RVAPSLRSQKGAIWTKSQTNFDWWDVEIVFRVTGRGRIGADGLAFWYTTEKGDYNGPVFGSSDRW 134
            |:.||::::.||:|::...:|..|:||:..||||.||.||.|:|.|||.:: |..|.|......|
  Rat   116 RLVPSMKNRSGAVWSEISVSFPSWEVEMQMRVTGPGRRGALGVAMWYTKDR-DQVGSVVEGLASW 179

  Fly   135 NGLAIMFDSFDNDNKHNNPYISAVLNDGTKLYDHAEDGTTQLLSGCLRDFRNKPFPTRARIEYYN 199
            :|:.|.|||..|| ..|.|.|..:.:||..|.:...|||.:.|..|||||||:|.|.||||.|:.
  Rat   180 DGIGIYFDSSSND-VQNGPAIRVLASDGHDLQEQFGDGTVRELGSCLRDFRNRPHPFRARITYWR 243

  Fly   200 NVLTVMIHNGMSNNNDDYELCLRADGVNLPKNGYFGISAATGGLADDHDVFHFLTTSLHAAGQVQ 264
            ..|.|.:..|:: .||..|:|:..:.:.|...|:||:||||..|||||||..|||.||...|..:
  Rat   244 QRLRVSLSGGLT-PNDPEEVCVDVEPLLLAPGGFFGVSAATSTLADDHDVLSFLTFSLRDPGSEE 307

  Fly   265 E-QPKVENQE-KLTQEYKEYQDKLEKQKQEYKKDH--PDEHKDEEDWEEFYESENQRELRQIWQG 325
            . ||..|.:: .|.::.:|.:.:|....:|   |.  |...|.:|:.|.|:      .|......
  Rat   308 ALQPFTEKEQFHLARKLEELKARLALGTRE---DTILPLNSKAQEEGERFF------NLEDTLSR 363

  Fly   326 QSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPAAGGVPQQQLPVGAVSRSDVDLLLT 390
            ||||...|:.|||::|:...:.:..|                |.|.|.: |.|..:.:.|..||.
  Rat   364 QSQILQALQALSRQMDQAEKQWKQQL----------------GSVVQIR-PEGGWNTAKVSTLLY 411

  Fly   391 NQNMLLSSIREIRQLVGDI--NVRTDNIQTNQKHAPTAQIQSTGYDVQTLIAEMRDGMNQVKQGI 453
            .|..|:.:::|:|:....:  ......:....||......|:.|    .|..::||.:....:  
  Rat   412 GQRTLIQALQEMREAAAQMASGAHVFYLPVGTKHHFFELDQTLG----LLQKDLRDLVKMTAK-- 470

  Fly   454 THVGQRLAAPQGAAQVANCPTGNCVGVTLFLSVTVVQLLLVFIYNVFK 501
                    .|:.:..:....|  |:..::||...::|.:..|.|..|:
  Rat   471 --------PPRPSGWLPGSST--CLRTSIFLFFLLIQTVGFFCYMNFR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ergic53NP_524776.1 lectin_ERGIC-53_ERGL 33..258 CDD:173890 104/224 (46%)
Lman1lXP_017451046.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351584
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3838
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377709at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12223
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.810

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