DRSC/TRiP Functional Genomics Resources

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Protein Alignment ergic53 and Lman2

DIOPT Version :10

Sequence 1:NP_524776.1 Gene:ergic53 / 44679 FlyBaseID:FBgn0035909 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001108496.1 Gene:Lman2 / 290994 RGDID:1308965 Length:358 Species:Rattus norvegicus


Alignment Length:272 Identity:91/272 - (33%)
Similarity:142/272 - (52%) Gaps:20/272 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TFLAILCFLAWNPSSEATGNLSPGAVGVHRRFEYKYSFKPPYLAQKDGTVPFWEYGGNAIASSES 68
            |||..|..|....:....||        ....:.::|...||......::|.|::.|:.:.:|:.
  Rat    33 TFLHFLLLLGLVAADITDGN--------SEHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQY 89

  Fly    69 VRVAPSLRSQKGAIWTKSQTNFDWWDVEIVFRV--TGRGRIGADGLAFWYTTEKGDYNGPVFGSS 131
            ||:.|..||::|:||.........|::.:.|:|  ||:..:..||:|.|||.:: ...||||||.
  Rat    90 VRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDR-LVPGPVFGSK 153

  Fly   132 DRWNGLAIMFDSFDNDNKHNN--PYISAVLNDGTKLYDHAEDGTTQLLSGCLRDFRNKPFPTRAR 194
            |.::|||:..|::.||.....  ||||.::|:|:..|||::||....|:||..||||:...|...
  Rat   154 DNFHGLAVFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWSELAGCTADFRNRDHDTFLA 218

  Fly   195 IEYYNNVLTVMIHNGMSNNNDDYELCLRADGVNLPKNGYFGISAATGGLADDHDVFHFLTTSLHA 259
            :.|....||||  ..:.:.| :::.|:...||.||...|||.||.||.|:|:||:.......|  
  Rat   219 VRYSRGRLTVM--TDLEDKN-EWKNCIDVTGVRLPTGYYFGASAGTGDLSDNHDLISIKLFQL-- 278

  Fly   260 AGQVQEQPKVEN 271
              .|:..|:.|:
  Rat   279 --TVERTPEEES 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ergic53NP_524776.1 lectin_ERGIC-53_ERGL 33..258 CDD:173890 80/228 (35%)
HEC1 <267..>421 CDD:444066 2/5 (40%)
Lman2NP_001108496.1 lectin_VIP36_VIPL 55..303 CDD:173889 84/242 (35%)

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