DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK29

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_974150.2 Gene:CPK29 / 843936 AraportID:AT1G76040 Length:561 Species:Arabidopsis thaliana


Alignment Length:526 Identity:146/526 - (27%)
Similarity:216/526 - (41%) Gaps:115/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDK---IPGHARARVFREVETFHHCQGHLGIL 177
            ||.|..| ||.|.:.....|.:.....|||.|.|.|   |.......|.|||....|..|...|:
plant   111 LYDLHKE-LGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRREVMILQHLTGQPNIV 174

  Fly   178 QLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKP 242
            :....:||.:..:||.|..:||.|..||.:...:||.||:.|.::|.:.:...|..|:.||||||
plant   175 EFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQIVNVVHVCHFMGVVHRDLKP 239

  Fly   243 ENILCVKTDSLCPIKICDFDLGSGI---KFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEA 304
            ||.|.|..:...|||..||.|...|   |...||            ||||.::||||:.      
plant   240 ENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRDI------------VGSAYYVAPEVLH------ 286

  Fly   305 HYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEW 369
            ..|.|..|:||.||:.||||.|.|||         |  ||..:|    :||:|.||......:.|
plant   287 RNYGKEIDVWSAGVMLYILLSGVPPF---------W--GETEKT----IFEAILEGKLDLETSPW 336

  Fly   370 HDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWI--RMCEQEPPASKHGRRHKALQTPSNIRRNH 432
            ..:|:.|||||..:|::....|::|...|.|||:  .....:|..|....|.|..:..:.:::  
plant   337 PTISESAKDLIRKMLIRDPKKRITAAEALEHPWMTDTKISDKPINSAVLVRMKQFRAMNKLKK-- 399

  Fly   433 QSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNR 497
                         :|:| |:.::.|        ...|....|.:.:..:||              
plant   400 -------------LALK-VIAENLS--------EEEIKGLKQTFKNMDTDE-------------- 428

  Fly   498 SQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGG------FKTLNVHEE--DD 554
                  |....:....:.:|  |..|:.:.....:...|...:..|      |.|..:|..  :.
plant   429 ------SGTITFDELRNGLH--RLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEK 485

  Fly   555 DDEGLEAFGHIDDD-------DEWSRSRREYQQQCETLGEDRFRRQSGSEGDEVEDDEDGENEDY 612
            ::..:|||.:.|.|       ||...|..||     .:|:|       :..|||.:|.|.:|:..
plant   486 EENLIEAFKYFDKDRSGFITRDELKHSMTEY-----GMGDD-------ATIDEVINDVDTDNDGR 538

  Fly   613 QHYKHY 618
            .:|:.:
plant   539 INYEEF 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 105/292 (36%)
S_TKc 117..403 CDD:214567 104/291 (36%)
CPK29NP_974150.2 S_TKc 112..370 CDD:214567 104/291 (36%)
STKc_CAMK 112..369 CDD:270687 103/290 (36%)
PTZ00184 405..548 CDD:185504 33/182 (18%)
EFh 417..476 CDD:238008 10/80 (13%)
EFh 489..549 CDD:238008 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.