DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK30

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_177612.2 Gene:CPK30 / 843813 AraportID:AT1G74740 Length:541 Species:Arabidopsis thaliana


Alignment Length:544 Identity:136/544 - (25%)
Similarity:205/544 - (37%) Gaps:139/544 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARAR-------V 160
            |:....|.|...:.| :.|..||.|.:.....|.:..|....|.|.|.|    .:.|       |
plant    45 RVIPMSHQSQISDKY-ILGRELGRGEFGITYLCTDRETREALACKSISK----RKLRTAVDVEDV 104

  Fly   161 FREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIAS 225
            .|||........|..:::|...:||:|..:||.|...||.|..||.....::|..|:.:.:.||.
plant   105 RREVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYTERAAATVARTIAE 169

  Fly   226 GLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLG----SGIKFTTDISSPAATPQLLTPV 286
            .:...|..|:.||||||||.|.........:|..||.|.    .|.:||..:.||          
plant   170 VVRMCHVNGVMHRDLKPENFLFANKKENSALKAIDFGLSVLFKPGERFTEIVGSP---------- 224

  Fly   287 GSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQE 351
               .:|||||:      ...|....|:||.|||.||||||.|||         |...|      :
plant   225 ---YYMAPEVL------KRNYGPEVDVWSAGVILYILLCGVPPF---------WAETE------Q 265

  Fly   352 LLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHG 416
            .:..:|..|...|....|..:|:.||.|:..:|...::.||:|:.||:||||:..::.|      
plant   266 GVALAILRGVLDFKRDPWSQISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQNAKKAP------ 324

  Fly   417 RRHKALQTPSNIRRNHQSAREISQFAESAMAVK---RVVLQHFSMRYDYMKERPNIYQPSQAYMD 478
                      |:.........:.||:......|   ||:.:|.|:      :...:.:.....||
plant   325 ----------NVPLGDIVRSRLKQFSMMNRLKKKALRVIAEHLSI------QEVEVIRNMFTLMD 373

  Fly   479 AYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRR--------------SSRN 529
               |:|                         .|::|.:. .||..|:              ...:
plant   374 ---DDN-------------------------DGKISYLE-LRAGLRKVGSQLGEPEIKLLMEVAD 409

  Fly   530 ASRNASAIYPNSGGFKTLNVH--EEDDDDEGLEAFGHIDDDDE-WSRSRREYQQQCETLGE---- 587
            .:.|....|   |.|..:.:|  :.::|:...:||...|.|.. :..|....:...:.|||    
plant   410 VNGNGCLDY---GEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNS 471

  Fly   588 ---DRFRRQSGSEGDEVEDDEDGE 608
               |..|        ||:.|:||:
plant   472 VIIDIMR--------EVDTDKDGK 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 92/298 (31%)
S_TKc 117..403 CDD:214567 92/296 (31%)
CPK30NP_177612.2 STKc_CAMK 58..316 CDD:270687 91/296 (31%)
PTZ00184 353..497 CDD:185504 32/181 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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