DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK33

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001320603.1 Gene:CPK33 / 841492 AraportID:AT1G50700 Length:547 Species:Arabidopsis thaliana


Alignment Length:603 Identity:141/603 - (23%)
Similarity:222/603 - (36%) Gaps:157/603 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ERQAEL-NRHKEEMQ---------------KKRRKKRISSSLHSSTFQEL---YKLTGEILGEGA 128
            ||..|: ||.:...|               :...|...::::....::::   |.|:.| ||.|.
plant    20 ERSVEIENRRRSTHQDPSKISTGTNQPPPWRNPAKHSGAAAILEKPYEDVKLFYTLSKE-LGRGQ 83

  Fly   129 YASVQTCVNIYTDLEYAVKVIDK---IPGHARARVFREVETFHHCQGHLGILQLIEFFEDDEKFY 190
            :.....|....|...:|.|.|.|   :....:..:.||::...|..|...|::....:||::...
plant    84 FGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVN 148

  Fly   191 LVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCP 255
            ||.|...||.|..||.....:||..|:.:.::|.:.::..|..|:.||||||||.|....|....
plant   149 LVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKAL 213

  Fly   256 IKICDFDLGSGI---KFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLG 317
            ||..||.|...|   :...||            ||||.::||||:      ...|.|..|:||.|
plant   214 IKATDFGLSVFIEEGRVYKDI------------VGSAYYVAPEVL------KRRYGKEIDIWSAG 260

  Fly   318 VIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISN 382
            :|.||||.|.|||         |...|      :.:|::|.||...|....|..:|:.||||:..
plant   261 IILYILLSGVPPF---------WAETE------KGIFDAILEGEIDFESQPWPSISNSAKDLVRR 310

  Fly   383 LLVKKASNRLSAEAVLNHPWIR---MCEQEPPASKHGRRHKALQTPSNIRR-------NHQSARE 437
            :|.:....|:||..||.|||:|   ....:|..|....|.|..:..:.:::       .:....|
plant   311 MLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEE 375

  Fly   438 ISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNP 502
            |...  .||..........::.|:.:||                                     
plant   376 IQGL--KAMFANIDTDNSGTITYEELKE------------------------------------- 401

  Fly   503 ASSLCGYGGRMSSMHGQRANSRRS-----------------------SRNASRNASAIYPNSGGF 544
              .|...|.|::....::.....|                       ..:...|.|..|..   |
plant   402 --GLAKLGSRLTEAEVKQLMDAVSFDQDKIVHLLLECLKTPIRVFVIQADVDGNGSIDYIE---F 461

  Fly   545 KTLNVHEE--DDDDEGLEAFGHIDDD-------DEWSRSRREYQQQCETLGEDRFRRQSGSEGDE 600
            .|..:|..  :.::...:||.|.|.|       ||...:.:||     .:|:|...:       |
plant   462 ITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEY-----GMGDDATIK-------E 514

  Fly   601 VEDDEDGENEDYQHYKHY 618
            :..|.|.:|:...:|..:
plant   515 ILSDVDADNDGRINYDEF 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 95/296 (32%)
S_TKc 117..403 CDD:214567 95/291 (33%)
CPK33NP_001320603.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.