DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CDPK19

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_197446.1 Gene:CDPK19 / 832065 AraportID:AT5G19450 Length:533 Species:Arabidopsis thaliana


Alignment Length:567 Identity:148/567 - (26%)
Similarity:213/567 - (37%) Gaps:148/567 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARAR-------VFREVETFHHCQGH 173
            :|.| |..:|.|.:.....|.:|.|..:||.|.|.|    .:.|       |.||||...|...|
plant    56 MYDL-GREVGRGEFGITYLCTDIKTGEKYACKSISK----KKLRTAVDIEDVRREVEIMKHMPRH 115

  Fly   174 LGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHR 238
            ..|:.|.:.||||:..::|.|...||.|..||.....::|..|:.::|.|...:...||.|:.||
plant   116 PNIVSLKDAFEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHR 180

  Fly   239 DLKPENILCVKTDSLCPIKICDFDL------GSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVV 297
            ||||||.|.........:|..||.|      |.|.   .:|            |||..:|||||:
plant   181 DLKPENFLFANKKETSALKAIDFGLSVFFKPGEGF---NEI------------VGSPYYMAPEVL 230

  Fly   298 DLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHF 362
                  ...|....|:||.|||.||||||.|||         |...|      :.:.::|.....
plant   231 ------RRNYGPEVDIWSAGVILYILLCGVPPF---------WAETE------QGVAQAIIRSVI 274

  Fly   363 SFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKALQTPSN 427
            .|....|..||:.||||:..:|......||||..||.|.||:..::.|..|. |...||      
plant   275 DFKRDPWPRVSETAKDLVRKMLEPDPKKRLSAAQVLEHSWIQNAKKAPNVSL-GETVKA------ 332

  Fly   428 IRRNHQSAREISQFAESAMAVK---RVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKP 489
                     .:.||:......|   ||:.:|.|     ::|...|.:..: .||:......|.:.
plant   333 ---------RLKQFSVMNKLKKRALRVIAEHLS-----VEEVAGIKEAFE-MMDSKKTGKINLEE 382

  Fly   490 PGHYTRNRSQRN----------PASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGGF 544
            .........|:.          .|:.:.|.|..                           |.|.|
plant   383 LKFGLHKLGQQQIPDTDLQILMEAADVDGDGTL---------------------------NYGEF 420

  Fly   545 KTLNVH-EEDDDDEGL-EAFGHIDDDDEWSRSRREYQQQCETLGEDRFRRQSGSEGD-------- 599
            ..::|| ::..:||.| :||...|            |.|.:.:..:..|.....|.|        
plant   421 VAVSVHLKKMANDEHLHKAFSFFD------------QNQSDYIEIEELREALNDEVDTNSEEVVA 473

  Fly   600 ----EVEDDEDGENEDYQHYKHYWRELDEEEGDDYLYEQQQRVDDKF 642
                :|:.|:|| ...|:.:....:     .|.|:....:|...::|
plant   474 AIMQDVDTDKDG-RISYEEFAAMMK-----AGTDWRKASRQYSRERF 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 100/299 (33%)
S_TKc 117..403 CDD:214567 100/298 (34%)
CDPK19NP_197446.1 STKc_CAMK 57..314 CDD:270687 100/297 (34%)
FRQ1 354..501 CDD:227455 33/197 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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