DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK1

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_196107.1 Gene:CPK1 / 830366 AraportID:AT5G04870 Length:610 Species:Arabidopsis thaliana


Alignment Length:662 Identity:176/662 - (26%)
Similarity:261/662 - (39%) Gaps:140/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSGTAASAAAAKASNNNNNNHPRGSGDSGIRSGSGISCSNTDNSCSQSQSDG-QN---------- 58
            ::|...|.:||..       .||...||...|...|:............||. ||          
plant    10 RNGFLQSVSAAMW-------RPRDGDDSASMSNGDIASEAVSGELRSRLSDEVQNKPPEQVTMPK 67

  Fly    59 ----------ELTRYSS----EDVSGNESSEAPNMTEVERQAELNRHKEEMQKK-RRKKRISSS- 107
                      |:...|.    |::|.....|....|:.|.:.|.........|| :..||:||: 
plant    68 PGTDVETKDREIRTESKPETLEEISLESKPETKQETKSETKPESKPDPPAKPKKPKHMKRVSSAG 132

  Fly   108 ------LHSST--FQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDK---IPGHARARVF 161
                  |...|  |:|.|.| |..||:|.:.:...||...|..|:|.|.|.|   :.......|.
plant   133 LRTESVLQRKTENFKEFYSL-GRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVR 196

  Fly   162 REVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASG 226
            ||::..||..||..::.:...:||....:||.|...||.|..||.:...::|.:|:::.:.|...
plant   197 REIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGV 261

  Fly   227 LDFLHKKGIAHRDLKPENILCVK--TDSLCPIKICDFDLGSGIK---FTTDISSPAATPQLLTPV 286
            ::..|..|:.||||||||.|.|.  .|||  :|..||.|....|   ..||:            |
plant   262 VEACHSLGVMHRDLKPENFLFVSKHEDSL--LKTIDFGLSMFFKPDDVFTDV------------V 312

  Fly   287 GSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQE 351
            ||..::||||:      ...|....|:||.|||.||||.|.|||         |...|      :
plant   313 GSPYYVAPEVL------RKRYGPEADVWSAGVIVYILLSGVPPF---------WAETE------Q 356

  Fly   352 LLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHG 416
            .:||.:..|...|....|..:|:.||||:..:||:....||:|..||.|||:::....|      
plant   357 GIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAP------ 415

  Fly   417 RRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFS-MRYDYMKERPNIYQPSQAYMDAY 480
              .|.|.:....|....||  :::|.:.|:   ||:.:..| .....:||..|:....::....:
plant   416 --DKPLDSAVLSRMKQFSA--MNKFKKMAL---RVIAESLSEEEIAGLKEMFNMIDADKSGQITF 473

  Fly   481 SDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSG--G 543
            .:.....|..|                             ||.:.|.......|:.: .|||  .
plant   474 EELKAGLKRVG-----------------------------ANLKESEILDLMQAADV-DNSGTID 508

  Fly   544 FK-----TLNVHEEDDDDEGLEAFGHIDDDDEWSRSRREYQQQCETLGEDRFRRQSGSEGDEVED 603
            :|     ||::::.:.:|....||.:.|.|.....:..|.||.||..|.:..|.:....  :|:.
plant   509 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMR--DVDQ 571

  Fly   604 DEDGENEDYQHY 615
            |.|| ..||..:
plant   572 DNDG-RIDYNEF 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 100/295 (34%)
S_TKc 117..403 CDD:214567 99/293 (34%)
CPK1NP_196107.1 STKc_CAMK 149..407 CDD:270687 98/293 (33%)
PTZ00184 444..586 CDD:185504 34/172 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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