DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK18

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001190932.1 Gene:CPK18 / 829763 AraportID:AT4G36070 Length:561 Species:Arabidopsis thaliana


Alignment Length:623 Identity:149/623 - (23%)
Similarity:241/623 - (38%) Gaps:171/623 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SGDSGIRSGSGISCSNTDNSCSQSQSDGQNELTRYSSEDVSGNESSEAPNMTEVERQAELNRHKE 93
            |.....|.|:|....|.|     |.:.|:      :||.||                   |::|:
plant     6 SSPKATRRGTGSRNPNPD-----SPTQGK------ASEKVS-------------------NKNKK 40

  Fly    94 EMQKKRRK--------KRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID 150
            ..:|.:.:        |||... ::..|...|.: |::||.|.:.......:.......|||.||
plant    41 NTKKIQLRHQGGIPYGKRIDFG-YAKDFDNRYTI-GKLLGHGQFGFTYVATDNNNGNRVAVKRID 103

  Fly   151 KIPGHARAR-------VFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRI--Q 206
            |    |:..       |.|||:......||..::.....|||....|:|.|..:||.||.||  :
plant   104 K----AKMTQPIEVEDVKREVKILQALGGHENVVGFHNAFEDKTYIYIVMELCDGGELLDRILAK 164

  Fly   207 EHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGS----GI 267
            :...::|.:|:.:::::.......|.:|:.|||:||||.|...|:....:|..||.|..    |:
plant   165 KDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKSTEEGSSLKATDFGLSDFIKPGV 229

  Fly   268 KFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSG 332
            || .||            ||||.::||||:....|      ...|:||:|||.||||||..||  
plant   230 KF-QDI------------VGSAYYVAPEVLKRRSG------PESDVWSIGVITYILLCGRRPF-- 273

  Fly   333 NCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAV 397
                   |::      .|:.:|..:......|.|..|..:|:.|||.:..||||:...||:|...
plant   274 -------WDK------TQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRARLTAAQA 325

  Fly   398 LNHPWIRMCEQEPPASKHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDY 462
            |:|.|:          |.|.....:....::..|   .|:..:|:.    :|::.|:..:...  
plant   326 LSHSWV----------KEGGEASEVPIDISVLNN---MRQFVKFSR----LKQIALRALAKTI-- 371

  Fly   463 MKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSS 527
                      ::..:|...|:         :......:|.:.||       ..|....|......
plant   372 ----------NEDELDDLRDQ---------FDAIDIDKNGSISL-------EEMRQALAKDVPWK 410

  Fly   528 RNASRNASAIYPNSGGFKTLNVHEEDDDDEGLEAFG-------HID-----DDDEWSRSRREYQQ 580
            ...:|.|..:..|            |.:.:||..|.       |::     |.::|.:..|....
plant   411 LKDARVAEILQAN------------DSNTDGLVDFTEFVVAALHVNQLEEHDSEKWQQRSRAAFD 463

  Fly   581 QCETLGE-----DRFRRQSGSEG------DEVEDDEDG 607
            :.:..|:     :..|.|:|.:|      :|.:.||||
plant   464 KFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVDEDG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 94/300 (31%)
S_TKc 117..403 CDD:214567 94/298 (32%)
CPK18NP_001190932.1 STKc_CAMK 70..330 CDD:270687 94/298 (32%)
S_TKc 71..331 CDD:214567 94/298 (32%)
PTZ00184 367..514 CDD:185504 28/175 (16%)
EFh 378..437 CDD:238008 13/86 (15%)
EFh 459..513 CDD:238008 11/43 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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