DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK23

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001190672.1 Gene:CPK23 / 825809 AraportID:AT4G04740 Length:533 Species:Arabidopsis thaliana


Alignment Length:550 Identity:147/550 - (26%)
Similarity:213/550 - (38%) Gaps:130/550 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HKEEMQKKRRKKRISS-----------SLHSSTFQELYKL--TGEILGEGAYASVQTCVNIYTDL 142
            |..:.....||.:|.|           ::....|:::.|.  .|..||.|.......|..|.|..
plant    29 HIVDQVPDHRKPQIPSPSIPISVRDPETILGKPFEDIRKFYSLGRELGRGGLGITYMCKEIGTGN 93

  Fly   143 EYAVKVIDK---IPGHARARVFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSR 204
            .||.|.|.|   |....|..|..|::...|..|...::::...:||....:||.|...||.|..|
plant    94 IYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDR 158

  Fly   205 I--QEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGI 267
            |  |.|  :||..|:..||.|...:...|..|:.||||||||.|....:....:|:.||.|.:.|
plant   159 IIAQGH--YSERAAAGTIKSIVDVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVTDFGLSAFI 221

  Fly   268 ---KFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPP 329
               |...|:            |||..::||||:      ...|.|..|:||.|||.||||||.||
plant   222 EEGKIYKDV------------VGSPYYVAPEVL------RQSYGKEIDIWSAGVILYILLCGVPP 268

  Fly   330 FSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSA 394
            |         |...|      |.:|..|.:....|....|..:||.||||:..:|.:....|::|
plant   269 F---------WADNE------EGVFVEILKCKIDFVREPWPSISDSAKDLVEKMLTEDPKRRITA 318

  Fly   395 EAVLNHPWIRMCE-QEPPASKHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSM 458
            ..||.||||:..| .|.|..            |.:....:..|.:::..:.|:.|..|     |:
plant   319 AQVLEHPWIKGGEAPEKPID------------STVLSRMKQFRAMNKLKKLALKVSAV-----SL 366

  Fly   459 RYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANS 523
            ..:.:|....::    |.||.                |||            |.::....|...|
plant   367 SEEEIKGLKTLF----ANMDT----------------NRS------------GTITYEQLQTGLS 399

  Fly   524 RRSSRNASRNASAIYPNS--GGFKTLNVHE----------EDDDDEGLEAFGHIDDD-------D 569
            |..||.:......:...|  .|..|::.:|          ...|:...:||.|:|.|       |
plant   400 RLRSRLSETEVQQLVEASDVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQHLDKDKNGHITRD 464

  Fly   570 EWSRSRREYQQQCETLGEDRFRRQSGSEGD 599
            |...:.:||     .:|::...::..||.|
plant   465 ELESAMKEY-----GMGDEASIKEVISEVD 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 99/297 (33%)
S_TKc 117..403 CDD:214567 99/295 (34%)
CPK23NP_001190672.1 STKc_CAMK 82..326 CDD:270687 93/278 (33%)
S_TKc 84..327 CDD:214567 94/277 (34%)
EF-hand_7 374..433 CDD:290234 16/90 (18%)
EFh 374..433 CDD:238008 16/90 (18%)
EFh 445..>492 CDD:238008 12/49 (24%)
EF-hand_7 446..>492 CDD:290234 12/48 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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