DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CRK

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001190048.1 Gene:CRK / 824217 AraportID:AT3G50530 Length:632 Species:Arabidopsis thaliana


Alignment Length:651 Identity:151/651 - (23%)
Similarity:238/651 - (36%) Gaps:204/651 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CSNTDNSCSQSQSDGQN------ELTRYSSEDVSG---------NESSEAP-------------- 77
            |::..||.:..|:..:|      |..:.||..|:|         ||..::|              
plant     4 CTSKPNSSNSDQTPARNSPLPASESVKPSSSSVNGEDQCVTTTNNEGKKSPFFPFYSPSPAHYFF 68

  Fly    78 -----------NMTEVERQAELNR---------HKEEMQKKRR--KKRISSSL------------ 108
                       |.|....:....|         |...:..:|.  .|..||::            
plant    69 SKKTPARSPATNSTNSTPKRFFKRPFPPPSPAKHIRAVLARRHGSVKPNSSAIPEGSEAEGGGVG 133

  Fly   109 ------HSSTFQELYKLTGEILGEGAYASVQTCVNIY-----TDLEYAVKVIDK---IPGHARAR 159
                  .|.:|...|:| |:.:|.|.:.  .||...:     ...:.|||||.|   ....|...
plant   134 LDKSFGFSKSFASKYEL-GDEVGRGHFG--YTCAAKFKKGDNKGQQVAVKVIPKAKMTTAIAIED 195

  Fly   160 VFREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRI-QEHICFSEHEASQIIKEI 223
            |.|||:......||..:....:.:||.:..|:|.|...||.||.|| .....::|.:|..::.:|
plant   196 VRREVKILRALSGHNNLPHFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKTVMIQI 260

  Fly   224 ASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIK-----------------FTT 271
            .:.:.|.|.:|:.||||||||.|....:....:|..||.|...::                 ..|
plant   261 LNVVAFCHLQGVVHRDLKPENFLFTSKEDTSQLKAIDFGLSDYVRPGKALRLYAICKLRFQNLET 325

  Fly   272 DISSPAAT-----PQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFS 331
            .|...|.|     .:|...||||.::||||:.      ..|....|:||:|||.||||||..|| 
plant   326 SICLYALTIAFADERLNDIVGSAYYVAPEVLH------RSYSTEADIWSVGVIVYILLCGSRPF- 383

  Fly   332 GNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEA 396
                    |.|.|:.      :|.::.:...||.:..|..:|.||:|.:..||.|....||:|..
plant   384 --------WARTESG------IFRAVLKADPSFDDPPWPLLSSEARDFVKRLLNKDPRKRLTAAQ 434

  Fly   397 VLNHPWIRMCEQEPPASKHGRRHKALQTPSNI-----RRNHQSAREISQFAESAMAVKRVVLQHF 456
            .|:||||:....             .:.|.:|     .|.:..:..:.:.|..|::....|.:.|
plant   435 ALSHPWIKDSND-------------AKVPMDILVFKLMRAYLRSSSLRKAALRALSKTLTVDELF 486

  Fly   457 SMRYDYMKERPNIYQPSQ-----------AYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYG 510
                 |::|:..:.:||:           |.|...:|...:.:.|                 .:.
plant   487 -----YLREQFALLEPSKNGTISLENIKSALMKMATDAMKDSRIP-----------------EFL 529

  Fly   511 GRMSSMHGQRANSRRSSRNASRNASAIYPNSGGFKTLNVHEEDDDDEGLEAFGHIDDDDEWSRSR 575
            |::|::..:|.:.......|                |:||:       |||.      |.|.:..
plant   530 GQLSALQYRRMDFEEFCAAA----------------LSVHQ-------LEAL------DRWEQHA 565

  Fly   576 R 576
            |
plant   566 R 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 98/318 (31%)
S_TKc 117..403 CDD:214567 98/316 (31%)
CRKNP_001190048.1 STKc_CAMK 147..440 CDD:270687 97/316 (31%)
S_TKc 148..441 CDD:214567 98/316 (31%)
Glo_EDI_BRP_like 526..>597 CDD:301325 14/87 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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