DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and CPK20

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_181425.1 Gene:CPK20 / 818476 AraportID:AT2G38910 Length:583 Species:Arabidopsis thaliana


Alignment Length:651 Identity:171/651 - (26%)
Similarity:263/651 - (40%) Gaps:138/651 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SGTAASAAAAKASNNNNNNHPRGSGDSGIRSGSGISCSNTDNSCSQSQSDGQNELTRYSSEDVSG 70
            :|...|.:||...|...::..:.|.|...|       ...|.|.:...|:|....|...:.....
plant    13 NGFLQSVSAAVWRNQKPDDSIKSSKDESSR-------KKNDKSVNGDDSNGHVSSTVDPAPSTLP 70

  Fly    71 NESSEAPNM---TEVERQAELNRHKEEMQKKRRKK------------RISSSLHSST--FQELYK 118
            ..|:..|.:   .|......:..:||:...|.:||            :|.|.|...|  .:::|.
plant    71 TPSTPPPPVKMANEEPPPKPITENKEDPNSKPQKKEAHMKRMASAGLQIDSVLGRKTENLKDIYS 135

  Fly   119 LTGEILGEGAYASVQTCVNIYTDLEYAVKVIDK----IPGHARARVFREVETFHHCQGHLGILQL 179
            : |..||:|.:.:...||:..|..|:|.|.|.|    .|.... .|.||::..||..||..::|:
plant   136 V-GRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVE-DVRREIQIMHHLSGHPNVIQI 198

  Fly   180 IEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPEN 244
            :..:||....::|.|...||.|..||.:...::|.:|:::.:.|...::..|..|:.||||||||
plant   199 VGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELARIIVGVIEACHSLGVMHRDLKPEN 263

  Fly   245 ILCVKTDSLCPIKICDFDLG----SGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAH 305
            .|.|..|....:|..||.|.    .|..| ||:            |||..::||||:      ..
plant   264 FLFVSGDEEAALKTIDFGLSVFFKPGETF-TDV------------VGSPYYVAPEVL------RK 309

  Fly   306 YYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWH 370
            :|...||:||.|||.||||.|.|||         |:..|      :.:||.:.:|...|....|.
plant   310 HYSHECDVWSAGVIIYILLSGVPPF---------WDETE------QGIFEQVLKGDLDFISEPWP 359

  Fly   371 DVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKALQTPSNIRRNHQSA 435
            .||:.||||:..:|::....|::...||.|||.|:            ...||..|.:      ||
plant   360 SVSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARV------------DGVALDKPLD------SA 406

  Fly   436 --REISQFAESAM-AVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNR 497
              ..:.||  ||| .:|::.::..:   :.:.|. .|....:.:....:|.:      ||.|...
plant   407 VLSRLQQF--SAMNKLKKIAIKVIA---ESLSEE-EIAGLKEMFKMIDTDNS------GHITLEE 459

  Fly   498 SQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNS-----GGFKTLNVH--EEDDD 555
            .::    .|...|..:           :.|.......:|...||     |.|....||  :.:.:
plant   460 LKK----GLDRVGADL-----------KDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNKIEKE 509

  Fly   556 DEGLEAFGHIDDDDEWSRSRREYQQQCETLG------EDRFRRQSGSEGDEVEDDEDGENEDYQH 614
            |....||.:.|.|.....:|.|.||.|:..|      :|..|        ||:.|.|| ..||..
plant   510 DHLFTAFSYFDQDGSGYITRDELQQACKQFGLADVHLDDILR--------EVDKDNDG-RIDYSE 565

  Fly   615 Y 615
            :
plant   566 F 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 97/295 (33%)
S_TKc 117..403 CDD:214567 97/293 (33%)
CPK20NP_181425.1 STKc_CAMK 134..391 CDD:270687 96/292 (33%)
FRQ1 432..572 CDD:227455 36/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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