DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lk6 and CPK24

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_180708.1 Gene:CPK24 / 817708 AraportID:AT2G31500 Length:582 Species:Arabidopsis thaliana


Alignment Length:696 Identity:176/696 - (25%)
Similarity:251/696 - (36%) Gaps:200/696 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SCSQSQSDGQNELTRYSSEDVSGNESSEAPNMTEVERQAELNRHKEEMQKKRR----------KK 102
            ||..|...|    :.:....|....||.:       |.:.:.|........||          .:
plant     3 SCVSSPLKG----SPFGKRPVRRRHSSNS-------RTSSVPRFDSSTNLSRRLIFQPPSRVLPE 56

  Fly   103 RISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKIPGHARAR-------V 160
            .|...:|..     |.| |:.||.|.:.....|:.|.|...:|.|.|.|    .:.|       |
plant    57 PIGDGIHLK-----YDL-GKELGRGEFGVTHECIEISTRERFACKRISK----EKLRTEIDVEDV 111

  Fly   161 FREVETFHHCQGHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIAS 225
            .||||.......|..|:...|.|||.:..|||.|...||.|..||.....::|..|:.:.|.|..
plant   112 RREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYTERAAASVAKTILE 176

  Fly   226 GLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAE 290
            .:...|:.|:.||||||||.|.........:|..||.|....|       ||  .:....|||..
plant   177 VVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFK-------PA--QRFNEIVGSPY 232

  Fly   291 FMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFE 355
            :|||||:      ...|....|:||.|||.||||||.|||         |...|      |.:..
plant   233 YMAPEVL------RRNYGPEIDVWSAGVILYILLCGVPPF---------WAETE------EGIAH 276

  Fly   356 SIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHK 420
            :|..|:..|....|..||.|||:|:.|:|.....:||:.:.||.|||||..|:.|          
plant   277 AIVRGNIDFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAP---------- 331

  Fly   421 ALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPN--IYQPSQAYMDAYSDE 483
            .:....|:|...|....:::|.:.   |.|:|..:.          ||  |....|.:....:|:
plant   332 NVNLGDNVRTKIQQFLLMNRFKKK---VLRIVADNL----------PNEEIAAIVQMFQTMDTDK 383

  Fly   484 NYNPKPPGHYT--------RNRSQRNP---------ASSLCGYGGRMS-------SMHGQRANSR 524
            |      ||.|        :...|..|         |:...| .|.:|       |:|.:|....
plant   384 N------GHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDG-NGMLSCDEFVTLSIHLKRMGCD 441

  Fly   525 RSSRNASRNASAIYPNSGGFKTLNVHEEDD------DDEGLEAFGHIDDDDEWSRSRREYQQQCE 583
            ...:.|.:...   .|..||..|     |:      ||:    .||.:.:|:|.:          
plant   442 EHLQEAFKYFD---KNGNGFIEL-----DELKVALCDDK----LGHANGNDQWIK---------- 484

  Fly   584 TLGEDRFRRQSGSEGDEVEDDEDGENEDYQHYKHYWRELDEEEGDDYLYEQQQ------------ 636
                |.|        .:|:.::|| ...:..:|...:     .|.|:....:|            
plant   485 ----DIF--------FDVDLNKDG-RISFDEFKAMMK-----SGTDWKMASRQYSRALLNALSIK 531

  Fly   637 RVDDKFGEE-------EFE---------DEPKEETQADNLKLSKAY 666
            ...:.||:.       ||.         |.||.::.  .|::||.|
plant   532 MFKEDFGDNGPKSHSMEFPIARKRAKLLDAPKNKSM--ELQISKTY 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 101/294 (34%)
S_TKc 117..403 CDD:214567 101/292 (35%)
CPK24NP_180708.1 STKc_CAMK 65..323 CDD:270687 100/297 (34%)
FRQ1 363..512 CDD:227455 37/205 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24349
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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