DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and CAMK2D

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001308498.1 Gene:CAMK2D / 817 HGNCID:1462 Length:533 Species:Homo sapiens


Alignment Length:636 Identity:156/636 - (24%)
Similarity:251/636 - (39%) Gaps:152/636 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 ISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVET 166
            ::|:...:.|.:.|:|..| ||:||::.|:.|:.|.|..|||.|:|:  |:......::.||...
Human     1 MASTTTCTRFTDEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI 64

  Fly   167 FHHCQ--GHLGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDF 229
               |:  .|..|::|.:...::...||||:.:.||.|...|.....:||.:||..|::|...::.
Human    65 ---CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 126

  Fly   230 LHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISS---PAATPQLLTPVGSAEF 291
            .|..||.||||||||:|.........:|:.||  |..|:...|..:   .|.||         .:
Human   127 CHLNGIVHRDLKPENLLLASKSKGAAVKLADF--GLAIEVQGDQQAWFGFAGTP---------GY 180

  Fly   292 MAPEVVDLFVGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFES 356
            ::|||:     ....|.|..|:|:.|||.||||.|||||         |:..      |..|::.
Human   181 LSPEVL-----RKDPYGKPVDMWACGVILYILLVGYPPF---------WDED------QHRLYQQ 225

  Fly   357 IQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKA 421
            |:.|.:.||..||..|:.||||||:.:|....:.|::|...|.||||  |::...||...|    
Human   226 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI--CQRSTVASMMHR---- 284

  Fly   422 LQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYN 486
             |...:..:...:.|::    :.|:....:..::||.....:|:...:...::|.:.....||. 
Human   285 -QETVDCLKKFNARRKL----KGAILTTMLATRNFSAAKSLLKKPDGVKINNKANVVTSPKENI- 343

  Fly   487 PKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGGFKTLNVHE 551
            |.|                                              |:.|     :|..:|.
Human   344 PTP----------------------------------------------ALEP-----QTTVIHN 357

  Fly   552 EDDDDEGLEAFGHIDDDDEWSRSRREYQQQCETLGEDRFRRQSGSEGDEVEDDEDGENEDYQHYK 616
            .|.:.|..|:.....:|::....::|..:..|.|               :|...:|:.|.|....
Human   358 PDGNKESTESSNTTIEDEDVKARKQEIIKVTEQL---------------IEAINNGDFEAYTKIC 407

  Fly   617 HYWRELDEEEGDDYLYEQQQRVDDKFGEEEFEDEPKEETQADNLKLSKAYVEQVGETNVEKSKPQ 681
            .......|.|....|.|...     |....||:...:..:..:..:...:|..||          
Human   408 DPGLTAFEPEALGNLVEGMD-----FHRFYFENALSKSNKPIHTIILNPHVHLVG---------- 457

  Fly   682 DDNG--GYIREDLIMDNMDMKKNTQQSEFAKLTIMRNDAQTEENKIMQQQD 730
            ||..  .|||....||...|.|.               .|:||.::..::|
Human   458 DDAACIAYIRLTQYMDGSGMPKT---------------MQSEETRVWHRRD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 99/294 (34%)
S_TKc 117..403 CDD:214567 99/292 (34%)
CAMK2DNP_001308498.1 STKc_CaMKII 12..303 CDD:270988 107/336 (32%)
CaMKII_AD 380..507 CDD:285524 30/159 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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