DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and camk2b

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:XP_012814756.1 Gene:camk2b / 780379 XenbaseID:XB-GENE-868398 Length:624 Species:Xenopus tropicalis


Alignment Length:600 Identity:149/600 - (24%)
Similarity:240/600 - (40%) Gaps:130/600 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 FQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVID--KIPGHARARVFREVETFHHCQ--GH 173
            |.:.|:|..|| |:||::.|:.||.:.|..|||.|:|:  |:......::.||...   |:  .|
 Frog     8 FTDEYQLYEEI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI---CRLLKH 68

  Fly   174 LGILQLIEFFEDDEKFYLVFEKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHR 238
            ..|::|.:...::...||:|:.:.||.|...|.....:||.:||..|::|...:...|:.|:.||
 Frog    69 PNIVRLHDSISEEGFHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 133

  Fly   239 DLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISS---PAATPQLLTPVGSAEFMAPEVVDLF 300
            ||||||:|.........:|:.||  |..|:...|..:   .|.||         .:::|||:   
 Frog   134 DLKPENLLLASKCKGAAVKLADF--GLAIEVQGDQQAWFGFAGTP---------GYLSPEVL--- 184

  Fly   301 VGEAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFP 365
              ....|.|..|:|:.|||.||||.|||||         |:..      |..|::.|:.|.:.||
 Frog   185 --RKEAYGKPVDIWACGVILYILLVGYPPF---------WDED------QHKLYQQIKAGAYDFP 232

  Fly   366 EAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEPPAS------------KHGRR 418
            ..||..|:.|||:||:.:|....:.|::|...|.|||:  |::...||            |...|
 Frog   233 SPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV--CQRSTVASMMHRQETVECLKKFNAR 295

  Fly   419 HK---ALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAY 480
            .|   |:.|.....||....|:.:..|....|.....|             ..:.|.:::.::..
 Frog   296 RKLKGAILTTMLATRNFSVGRQTTAPATITTAATSTAL-------------GLVEQGTKSLLNKK 347

  Fly   481 SDENYNPKPPGHYTRNRSQRNPASSLCGYGGRMSSMHGQRANSRRSSRNASRNASAIYPNSGGFK 545
            :|..   ||                              :.||.::|...:.....|.|.:...:
 Frog   348 TDVG---KP------------------------------QTNSTKNSAGVTSPKGPIPPAALETQ 379

  Fly   546 TLNVHEEDDDDEGLEAFGHIDDDDEWSRSRREYQQQCETLGEDRFRRQSG---SEGDEVEDDEDG 607
            |..:|...|..:......|.:.:||    ..:..:..:.|..  .||.||   :||.:....:..
 Frog   380 TTVIHNLVDGIKESSDSTHTNPEDE----EMKVMKFSDILSS--VRRGSGALEAEGPQAAVAQQP 438

  Fly   608 ENEDYQHYK-----------HYWRELDEEEGDDYLYEQQQRVDDKFGEEEFEDEPKEETQADNLK 661
            .:..:.|..           :..|...|.||..| ...|.|:........|....|:|.    :|
 Frog   439 LSPSFPHSPLAQPARFTDIFNTVRRGSEAEGVQY-SNTQHRLSQPHLNSPFVQPRKQEI----IK 498

  Fly   662 LSKAYVEQVGETNVE 676
            :::..:|.|...:.|
 Frog   499 ITEQLIEAVNNGDFE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 96/294 (33%)
S_TKc 117..403 CDD:214567 96/292 (33%)
camk2bXP_012814756.1 STKc_CaMKII 10..301 CDD:270988 103/327 (31%)
S_TKc 12..270 CDD:214567 96/292 (33%)
CaMKII_AD 492..619 CDD:285524 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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