DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lk6 and dclk2a

DIOPT Version :9

Sequence 1:NP_651986.2 Gene:Lk6 / 44672 FlyBaseID:FBgn0017581 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001128593.1 Gene:dclk2a / 572548 ZFINID:ZDB-GENE-050420-170 Length:810 Species:Danio rerio


Alignment Length:568 Identity:157/568 - (27%)
Similarity:257/568 - (45%) Gaps:97/568 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSGTAASAAAAKASNNNNNNHP-----RGSGDSGIRSGSGISCSNTDNSCSQSQSDGQNELTRYS 64
            :|.:..||.......:.|:..|     .|:.:|.|.:......|::..:..:|..:.:......|
Zfish   319 RSKSPGSARRTAGHFSTNSQSPVKSPINGAPNSQITTPKSAKSSSSSPTSPRSMRNFKIPTHHSS 383

  Fly    65 SEDVSGNESSEAPNMTEVERQAELNRHKEEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAY 129
            :.:|:|  |||.|.........|:|.::              :|.:||..:.||: |:::|:|.:
Zfish   384 AGNVNG--SSETPQHHNNSLSPEVNGNR--------------NLAASTILDKYKI-GKVIGDGNF 431

  Fly   130 ASVQTCVNIYTDLEYAVKVIDKIPGHARARVF-REVETFHHCQGHLGILQLIEFFEDDEKFYLVF 193
            |.|:.||...|..|:|:|:|||.....:..:. .||......: |..|:.|||..:...:.|||.
Zfish   432 AVVKECVERSTGKEFALKIIDKNKCRGKEHLIENEVAVLRRVK-HPNIIMLIEEVDTPAELYLVM 495

  Fly   194 EKINGGPLLSRIQEHICFSEHEASQIIKEIASGLDFLHKKGIAHRDLKPENIL-CVKTDSLCPIK 257
            |.:.||.|...|.....::|.:||.::.::|:.|.:||:..|.|||:||||:| |...:....:|
Zfish   496 ELVKGGDLFDAITSSTKYTEKDASVMVFDLAAALKYLHRMCIVHRDIKPENLLVCEYPNGTKSLK 560

  Fly   258 ICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEFMAPEVVDLFVGEAHYYDKRCDLWSLGVIAYI 322
            :.||.|      .|.:..|     |.|..|:..::|||:    :.|:. |..:.|:|:.|||.||
Zfish   561 LGDFGL------ATVVEGP-----LYTVCGTPTYVAPEI----IAESG-YGLKVDIWAAGVITYI 609

  Fly   323 LLCGYPPFSGNCGEDCGWNRGENCRTCQELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKK 387
            ||||:|||           |.||  ..||.||:.|..||..||...|.::||.||:||.::|...
Zfish   610 LLCGFPPF-----------RSEN--NLQEDLFDQILLGHLEFPSPFWDNISDSAKELIGHMLQVN 661

  Fly   388 ASNRLSAEAVLNHPWIRMCEQEPPASKHGRRHKALQTPSNIRRNHQSARE-------ISQFAESA 445
            ...|.:||.||:|||:    .|..|.::..:   ::....::::..|.::       :|....:|
Zfish   662 VEARYTAEDVLSHPWV----TEDAAMENNMK---MEVAGKLKKHFNSVQKQSNTSAGVSVIMNTA 719

  Fly   446 MAVKRVVLQHFSMRYDYMKERPNIYQPSQAYMDAYSDENYNPKPPGHYTRNRSQRNPASSLCGYG 510
            :..:.:.|.|  .|.|....||. .:||..          ||:      |.||.|..:|      
Zfish   720 LDKETIQLSH--RRQDRNPPRPE-KRPSST----------NPE------RRRSNRGRSS------ 759

  Fly   511 GRMSSMHGQRANSRRSSRNASRNASAIYPN--SGGFKTLNVHEEDDDD 556
              :.|...:.|.....:.:|:.:|.|..|:  |..|...|...|...|
Zfish   760 --VQSEDSRSAAPIEPATSANPSAPAALPSDPSPQFHECNTESEASKD 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lk6NP_651986.2 STKc_Mnk 115..403 CDD:270992 103/289 (36%)
S_TKc 117..403 CDD:214567 103/287 (36%)
dclk2aNP_001128593.1 DCX 59..149 CDD:214711
DCX 186..274 CDD:214711
STKc_DCKL2 418..676 CDD:271086 102/288 (35%)
S_TKc 420..677 CDD:214567 103/287 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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